G23624


Basic Information

Item Value
gene id G23624
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 17821767 ~ 17823318 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU29587
AGTCGTGATGGTTTTCTCGATCGTCCACTGTCGCTGCAGATGGAAGGGGATTGATTTTTCCGATCCAGGCTGTCGTTCCCCGAGATCGTGAGATttttattctgattttttttttttttttttccaacaattTATGGAATCCGGACTGATGCAgagattttatttgcatttttttatggaTGTGCTTTTGGATAACTTGGATATACACGGCCAAACCTTTCATGGTGAAGGGTGTCGGGCTGTGCTCAGTAAAGGAAGTGTGCCGGTCTGCCTGGACTGCCGTGTCTGAGCCGGTGGCCCCGTTGGTGTAGCGGGAGGAGGAGTCATGCCAGCTGGCTCAGGGAGCTCCGCATACATACTGAAGGGACacatgggggtggggtgggctGGGGGGGTGAGAGAACTTTGTGAATTAAAGAACATTGTAAAATTTTGGTTAAATAACTGTCTACTCCATATCTGTGCCCTTTCCCCCATGTCTCATTAGCTGAAATGAAAATTCACATGTGGTGGGATTGTCCTTCTGGAGCCTCTTGGTTTGATTAATGGCTGGCAATTGTTTAATCTGATCAATTTTAATTCCTTTGTAAATCAGGTACACCCCCCCTCTTATAAAGACAGGAATACCACTGAACCCATCACAGTGTATTGTCAGCACAGACATCTTGTGTTGCAGCAAGCGATTGGGCCACTTCTGTTGTATCGGCCTGTAAGAATGGCTCTTCCTGGTCGGCAGGAATTCGCGGGGGGTCGGGCCTATTTTCAAGCGGTTCAGTCGTCTAGTGATGCCTGTTCTCACTTAATTACAGATAGAGTAATATAGAAATTGTGTGGTGAAGAGCAAGAGGAGTTGCAGGCCCCacttctggaaccagacagccCAATTGAGAGGCTGGGTCGGGCAGCCCTCCCTTGCATGTTCAGGAGATTCTGGTGTCATGGGAAGCTTTAATACAACAGAATTTAATATTCAGGTCTTCGTTTTTTCTTTGAAGTGCTGGTAAAGCACTCTAACCTATAAGGGTCCCGctgtttgattttgttaaaaCCCCTGCACAGTGTGGCCCAGACACCCAGAGGGGTCAGCCAGCCTCCCTCTGCAGGGACTTCAACCTCTCCTGTGTTTGAGACCCACAGAGTTCCTCCTGACAACAGCAGAAGAGCCTGTTGCCGGTTCCTTTACGTTGTCAGAGTGACGCATTGGTTATGTAAACGCTTGATCAATTTGAACTTTCACTGACAGTCAGCCCAGCCCTGGATTTGAACGTCTGACCCTGCCAGTCTCCATGTCCCTGTCCTGTGTGTGTACAGCCatgcaaatgtaaaactgaGTACTTACTGTACGACTGGCAGGGGGAACAAAGCCCTCAAACTCTTGTACAGGGACTGGGTCCGGTAAAAGCTCAGTCTGACTTCTACTCGCTCGTTTtatttctctccttctccccttcAGTCCAAGCAGCCAGGGAGCTGGGCTCAATTGTCTGAGAAATCCAGTCTCAAACTCACACCAAAGTATGTAGCAAACTTTGTCATCACTGAAGATGTGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29587 True 1552 lncRNA 0.48 1 17821767 17823318

Neighbor

gene id symbol gene type direction distance location
AMCG00007401 NA coding downstream 172995 17592301 ~ 17648772 (-)
AMCG00007399 NA coding downstream 291168 17521789 ~ 17530599 (-)
AMCG00007392 kmt5b,LOC102794872 coding downstream 450511 17353112 ~ 17371256 (-)
AMCG00007393 NA coding downstream 472879 17327340 ~ 17348888 (-)
AMCG00007389 NA coding downstream 584041 17200860 ~ 17237726 (-)
AMCG00007405 NA coding upstream 576 17823894 ~ 17848724 (-)
AMCG00007406 kif23,LOC107686310 coding upstream 120453 17943771 ~ 17958062 (-)
AMCG00007411 NA coding upstream 139403 17962721 ~ 17978522 (-)
AMCG00007409 LOC105906560,LOC106562708,LOC106562601 coding upstream 156924 17980242 ~ 17991860 (-)
AMCG00007412 LOC107100407 coding upstream 215517 18038835 ~ 18048218 (-)
G23620 NA non-coding downstream 46921 17774551 ~ 17774846 (-)
G23580 NA non-coding downstream 163209 17658352 ~ 17658558 (-)
G23566 NA non-coding downstream 238327 17581606 ~ 17583440 (-)
G23550 NA non-coding downstream 309973 17511524 ~ 17511794 (-)
G23548 NA non-coding downstream 312568 17506509 ~ 17509199 (-)
G23629 NA non-coding upstream 82783 17906101 ~ 17906408 (-)
G23663 NA non-coding upstream 149588 17972906 ~ 18062992 (-)
G23676 NA non-coding upstream 248737 18072055 ~ 18074005 (-)
G23745 NA non-coding upstream 490833 18314151 ~ 18403277 (-)
G23799 NA non-coding upstream 795967 18619285 ~ 18620731 (-)
AMCG00007375 NA other downstream 1199862 16469467 ~ 16621905 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other downstream 1476187 16320997 ~ 16345580 (-)
AMCG00007366 NA other downstream 1507735 16237461 ~ 16314032 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other downstream 3788555 13981374 ~ 14033212 (-)
G22931 LOC100846954 other downstream 3875702 13945643 ~ 13946065 (-)
G23661 NA other upstream 232152 18055470 ~ 18058949 (-)
AMCG00007418 fem1b other upstream 379141 18202459 ~ 18208020 (-)
G23838 NA other upstream 953042 18776360 ~ 18777638 (-)
AMCG00007481 fam63b,LOC107750498 other upstream 1968383 19791701 ~ 19799752 (-)
AMCG00007487 NA other upstream 2091828 19915146 ~ 19923153 (-)

Expression


Co-expression Network