G23698 (fem1b)


Basic Information

Item Value
gene id G23698
gene name fem1b
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 18207078 ~ 18208308 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU29676
CTTTGACAAGAAATAAAAGACAGCCAGACACTAAGGGCAAATGATCACAGCGAGAGACAGAGTTACAGACACAGATCAATTAAAGGACAGAGAATAAGAGAGAGGTGGAAGGAACGGACGGACGAGGATAAGAGAgactgacagggagagaggcGTCAGGGAGGAGGGACACGGCGACATGGGGGACACAGTGCTCACCCGTCGAAGCGCACGGTGCCGGTCTGCTCGGTGTCCACCCGGTAGTGGTCCAGGAGCAGCCGGACCACCTTGGCGTGTCCGTTGCGGGCGGCGATGATGAGCGGCGTGGAGCGCTGGCCGCCGTGCTGGGTCACATGGCCGAGCAGGTAGCGGGTCTCGACCTCGCTGTGGTTGAGCAGCAGGGCGGCGAGCGTCAGGACCCGGCCCTCGCTCGCCGCCTTGTACACGTATGCGGCCAGCGACTCCATTCAGGCCCGCCGCCTGGCCTTCCCCGGAGACACCTCCGTCTTCTGCGCAGAAACAGTCGCCCACAACTAGACTCTCCGCAAAGCAGGCCGCCTCCCATTAAAAATCCCAGGACGGATCACGCTGCTCACTCGAAAAACATGCCGGTGGTTTAGAGGTCCCTCTGCGGACGGCCAGCGACCCTACGTTATGTGAAGATGTAGGTCTGCTCTAGGGTCAAATCTGTGGGTAGCACGGATACCACAGGCGAGCACGTAGGGTTATATTAAACCATACGTGGATATACGTGTTTTAATTCATCAAACGGAGAATGGAAACGTCAGCTAAATGGCACAAGCTCGGCTCGGTTCCCAGCGGTCGGGGTGCAGGGAGCGACCCGCAGGTCACTCGACTGAGGGGGCCCTTGTGCCGGTTGGCCGCCGTCCTCTCTCAGCGACTCCCCGGGCTCAGCAGCTCGGTCGTGCTCGGTGGggtttcttctctctttcttgttGTCAACGGGCCACCTTTCACCCCAGGATGCGAAACGCAAGCGGCGGTTTACGGCCCTCAAACGCCTCCGACGAGGAAACAAGGGCGAAGCTGCGAGGCGGTTCCGGCGGACATGTTTTGGTGGCGCACACTAATGGAGGCGCTTGTATGTCGTTGTCAGACATTGGATATTTCGTTATTGTCATATGAGTAAATGCGCCATAACTCTTTTAGTACATTAAAGAAGACGTTAAAATATGTGTGTCTAATgttacaatttacaaaacataagtggGCATATTTGTTCAATATACAA

Function

symbol description
fem1b Predicted to be active in nucleus. Orthologous to human FEM1B (fem-1 homolog B).

NR:

description
PREDICTED: protein fem-1 homolog B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29676 True 1231 TUCP 0.56 1 18207078 18208308

Neighbor

gene id symbol gene type direction distance location
AMCG00007416 NA coding upstream 8552 18168450 ~ 18198526 (+)
AMCG00007408 NA coding upstream 143585 18062234 ~ 18063493 (+)
AMCG00007407 anp32a,LOC107700478,LOC107740437,LOC107557695 coding upstream 148122 18054095 ~ 18058956 (+)
AMCG00007404 NA coding upstream 477799 17701160 ~ 17729279 (+)
AMCG00007403 morf4l1,LOC107596963,LOC107686360,LOC107738770 coding upstream 531524 17659682 ~ 17675554 (+)
AMCG00007415 LOC104955851 coding downstream 1320 18209628 ~ 18216895 (+)
AMCG00007428 NA coding downstream 189039 18397347 ~ 18402499 (+)
AMCG00007437 lctl,LOC105892386,LOC102794608 coding downstream 367534 18575842 ~ 18584276 (+)
AMCG00007438 rl4a,rpl4,LOC106561854 coding downstream 382372 18590680 ~ 18596353 (+)
AMCG00007436 tipin coding downstream 411000 18619308 ~ 18621844 (+)
G23696 NA non-coding upstream 2717 18202462 ~ 18204361 (+)
G23642 anp32a,LOC107755092,LOC107700478,LOC107557695,LOC107740437 non-coding upstream 144174 18050143 ~ 18062904 (+)
G23634 NA non-coding upstream 253803 17952551 ~ 17953275 (+)
G23631 NA non-coding upstream 263968 17942776 ~ 17943110 (+)
G23628 NA non-coding upstream 302129 17904558 ~ 17904949 (+)
G23780 NA non-coding downstream 377866 18586174 ~ 18586536 (+)
G23781 NA non-coding downstream 379708 18588016 ~ 18588690 (+)
G23782 NA non-coding downstream 380558 18588866 ~ 18589068 (+)
G23791 NA non-coding downstream 415613 18623921 ~ 18625059 (+)
G23804 NA non-coding downstream 506363 18714671 ~ 18719794 (+)
AMCG00007417 NA other upstream 5118 18198618 ~ 18201960 (+)
AMCG00007379 NA other upstream 1544378 16624390 ~ 16662700 (+)
AMCG00007350 tsg101 other upstream 2827113 15366661 ~ 15379965 (+)
AMCG00007352 NA other upstream 2919118 15276711 ~ 15287960 (+)
AMCG00007337 NA other upstream 3717386 14478673 ~ 14489692 (+)
AMCG00007414 NA other downstream 9422 18217730 ~ 18224936 (+)
G23724 NA other downstream 81800 18290108 ~ 18292338 (+)
AMCG00007433 NA other downstream 358934 18567242 ~ 18570472 (+)
AMCG00007452 NA other downstream 799242 19007550 ~ 19014899 (+)
G23893 eif3j,eif3ja,LOC107688938,LOC107712512 other downstream 842669 19050977 ~ 19056133 (+)

Expression


Co-expression Network