G23745


Basic Information

Item Value
gene id G23745
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 18314151 ~ 18403277 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU29732
CACACtgttactgtttatttaaaaactttttaataataattacaaaacaagaaaggtTCACAAGCTTTTTAATCGGCTgtttaacacaacacaacacaacacaactgggGACACGGGGCCGCGCTCGCAGTGGGCGAGGACCAACATTGATCGACACGTCACGAGGTCGCACGCCGCCGACTGTCCCCCGGCTGTGcaggacagacggacagactcTGCTCCAGCGCTCGGTTCTCTGCTCGGCCAAGTGTTCCTGGTGCCGCAGAGAGATGGAAATGGATCCGTCCACACTGGGGAGCGGCGGGTCTCTGGGGTTCACTGGGCTCTTTGAAGCCTTTTCTAGATTCTTCCAGTTACTGAAGAAGGTGGAAAACCAGCAGCACTGGTTTCTCCTGGGGTGGTTCAGATTGTTACGGGTGAGTGTTGACGGGTCCACAGGTTTTGTGAGGTGGGAGGAGGGGACTATGGCCGACTGAGTGAAGGGGCAGTAAACAACTAGGTGTCGATCAGTCGCTTTCcctgctccctctcccccccccacccttcctctccccttctccttctctctacCTACCtaccccccccatctctctctctctcagggcagAACCAGTGAGATGTTCGATTCCAAACCAACACAGAATGTACAGAGTCCTCTGGGGGTGTGGAGGATGGGCAGCTAGGATCAGGGCAGGGTGGATGGGGGAGAAGGGGGTGGCAGTGCCAGagagggtggagagagagagagagagagagagagagagagacacgtgcacccctcccctcccctcgtCACAGGTACTGGGctaattaaaaatgcaggaGACCGTTAAATTAAAACCGCAACACGGAGAGATTGCActgattaacatttaaaacagcagCCCCACCCCCTTCTTCACActcacaccta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29732 True 913 lncRNA 0.54 2 18314151 18403277

Neighbor

gene id symbol gene type direction distance location
AMCG00007426 NA coding downstream 3783 18306877 ~ 18310368 (-)
AMCG00007427 NA coding downstream 9833 18300855 ~ 18304318 (-)
AMCG00007422 NA coding downstream 19581 18290092 ~ 18294570 (-)
AMCG00007420 NA coding downstream 38900 18265414 ~ 18275251 (-)
AMCG00007419 pias1,LOC103372741,LOC103141277,LOC103466533,LOC106521199,LOC108229849 coding downstream 76843 18224331 ~ 18237308 (-)
AMCG00007429 smad3,smad3a,LOC108430827,LOC107740443,LOC107553101 coding upstream 944 18404221 ~ 18416448 (-)
AMCG00007431 LOC107393511,LOC101268919 coding upstream 24120 18427397 ~ 18427606 (-)
AMCG00007432 smad6 coding upstream 71873 18475150 ~ 18482530 (-)
AMCG00007434 NA coding upstream 92913 18496190 ~ 18503391 (-)
AMCG00007435 crybgx,LOC105906490,LOC103028443,LOC103368872,LOC107563446,LOC106562861 coding upstream 167291 18570568 ~ 18573120 (-)
G23676 NA non-coding downstream 240146 18072055 ~ 18074005 (-)
G23663 NA non-coding downstream 251159 17972906 ~ 18062992 (-)
G23629 NA non-coding downstream 407743 17906101 ~ 17906408 (-)
G23624 NA non-coding downstream 490833 17821767 ~ 17823318 (-)
G23620 NA non-coding downstream 539305 17774551 ~ 17774846 (-)
G23799 NA non-coding upstream 216008 18619285 ~ 18620731 (-)
G23813 NA non-coding upstream 308800 18712077 ~ 18714368 (-)
G23839 NA non-coding upstream 374568 18777845 ~ 18778069 (-)
G23840 NA non-coding upstream 375894 18779171 ~ 18779608 (-)
G23842 NA non-coding upstream 377560 18780837 ~ 18781092 (-)
AMCG00007418 fem1b other downstream 106131 18202459 ~ 18208020 (-)
G23661 NA other downstream 255202 18055470 ~ 18058949 (-)
AMCG00007375 NA other downstream 1692246 16469467 ~ 16621905 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other downstream 1968571 16320997 ~ 16345580 (-)
AMCG00007366 NA other downstream 2000119 16237461 ~ 16314032 (-)
G23838 NA other upstream 373083 18776360 ~ 18777638 (-)
AMCG00007481 fam63b,LOC107750498 other upstream 1388424 19791701 ~ 19799752 (-)
AMCG00007487 NA other upstream 1511869 19915146 ~ 19923153 (-)
AMCG00007494 NA other upstream 1768052 20171329 ~ 20222004 (-)
G24217 NA other upstream 1928236 20331513 ~ 20331811 (-)

Expression


Co-expression Network