G23791


Basic Information

Item Value
gene id G23791
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 18623921 ~ 18625059 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU29795
ATGGGTTAGattttattggaaaaaatactgtaatagaAAGTTCAGGAGTTAGTCTtgactaatatttaaaaaaaaaaaaaaaaaaaaaacatctgcattacAATATAGGAGCTGCCAAGAGAGTCTGGAAAGagttttgtacatttgttttttaaaacataatgggAAATCTGTGGCAGAAAGTTAGAATACCCTGAAaccctttcattttaaaaccatgcaCTGTTGTGCACTCCAACAATCAAGAAACCAAATGTTTCTAAAATTAAGTAAGACtcaaaagtttacaaaagactTGTACATTCATTACAAACAGCAATCTGACTGCCTGGCTTCAGTGCTACAGGCTGCCGTGTAAGATTCAGTGTTTTAAAGAGCAGCAAATCCTGAGTGAATTGTGTGGTTTGTTTCCACATCAGTTATATAAGTAGTTAtgtacaaaaagagaaaaaatgtcCAGAGACCACTTTGTTCCAGTGACTGAAATAGCTGCAAGAAGATTATGCAAAAGCTCAAGCCAGGCTTGGAAAAAGCATCTCAAGAGCtgatttgttctgtttttcatcCTGATGAattgggtaaaaaaaatataaaaatgccaGTCTGAACTCTAGAATGCTGGTATTTTTGTTCGGAATCCAGAATAAATGCTTTTCTGGATCAGGGGTGGAAACAAAACCACTTCGCAACCTGGCACTGAAACAGGGCAGCAGAGTCCTACAGGACAGGATAAGTGCCCTGGCACCTGTGACAACCCCTGCACAAGCTGAGGAGCCCATGTCAGCAGTGGGATAGAAAATCTCTATCGGGCTGCCAGTTCGAGGAGTGCCAGCTCACCGATCTCCTGCAGGACAGAGTAGAGTGTGACACCGGTGCTCTGCCTGAACTCCTGCTCTTCGCCCGCGATCTCCGGCGCCCGGCCgcgctcctcctccagctgggACGCCTCCTCGGCACTGCGCACCACCTCCTGCACCAGCTCTGACTTGCCCTGCACCCCCGGCCCACGAGCACCCCCCGGCTCCGGTTCTGTGCACTGGTGGGGACGGCTGCTGACCACCTCCAGATACAGACTGTCTGCGTGGCACCGAGACACCTGGACCGAGATCCGc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29795 True 1112 lncRNA 0.46 2 18623921 18625059

Neighbor

gene id symbol gene type direction distance location
AMCG00007440 NA coding upstream 878 18621872 ~ 18623043 (+)
AMCG00007436 tipin coding upstream 2077 18619308 ~ 18621844 (+)
AMCG00007438 rl4a,rpl4,LOC106561854 coding upstream 27568 18590680 ~ 18596353 (+)
AMCG00007437 lctl,LOC105892386,LOC102794608 coding upstream 39645 18575842 ~ 18584276 (+)
AMCG00007428 NA coding upstream 221422 18397347 ~ 18402499 (+)
AMCG00007439 megf11,LOC104967286 coding downstream 30507 18655566 ~ 18673142 (+)
AMCG00007444 NA coding downstream 64952 18690011 ~ 18712246 (+)
AMCG00007446 LOC101468289,LOC102208128,LOC106924056 coding downstream 125411 18750470 ~ 18790088 (+)
AMCG00007447 vwa9,LOC107583765 coding downstream 185796 18810855 ~ 18814928 (+)
AMCG00007450 NA coding downstream 250496 18875555 ~ 18896629 (+)
G23782 NA non-coding upstream 34853 18588866 ~ 18589068 (+)
G23781 NA non-coding upstream 35231 18588016 ~ 18588690 (+)
G23780 NA non-coding upstream 37385 18586174 ~ 18586536 (+)
G23696 NA non-coding upstream 419560 18202462 ~ 18204361 (+)
G23642 anp32a,LOC107755092,LOC107700478,LOC107557695,LOC107740437 non-coding upstream 561017 18050143 ~ 18062904 (+)
G23804 NA non-coding downstream 89612 18714671 ~ 18719794 (+)
G23887 NA non-coding downstream 379288 19004347 ~ 19087472 (+)
G23891 casc4 non-coding downstream 423027 19048086 ~ 19112325 (+)
G23886 NA non-coding downstream 455023 19080082 ~ 19083613 (+)
G24030 NA non-coding downstream 1004245 19629304 ~ 19630607 (+)
AMCG00007433 NA other upstream 53449 18567242 ~ 18570472 (+)
G23724 NA other upstream 331583 18290108 ~ 18292338 (+)
AMCG00007414 NA other upstream 398985 18217730 ~ 18224936 (+)
G23698 fem1b other upstream 415613 18207078 ~ 18208308 (+)
AMCG00007417 NA other upstream 421961 18198618 ~ 18201960 (+)
AMCG00007452 NA other downstream 382491 19007550 ~ 19014899 (+)
G23893 eif3j,eif3ja,LOC107688938,LOC107712512 other downstream 425918 19050977 ~ 19056133 (+)
AMCG00007483 NA other downstream 1314111 19939170 ~ 19951428 (+)
AMCG00007514 arpp19,LOC103358163,LOC105892485,LOC107740885,LOC107569706 other downstream 2435100 21060159 ~ 21066783 (+)
AMCG00007547 clg23h15orf48,clg1h15orf48,c13h15orf48 other downstream 3506514 22131573 ~ 22134714 (+)

Expression


Co-expression Network