G23804


Basic Information

Item Value
gene id G23804
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 18714671 ~ 18719794 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU29811
ACCAGCTCAGTATATGAAACCCTCTTCTCAGGACAGAAAGAAATTGCAGTAAATCAACGATGTGCAGTAGCACCCAGGCACCGCTCACTGGCTCTCGAATCATACTTCCCCATTCctgtttattggtttgttttgttttccatttcaattcaTGTGCACAGAATACAGTATTTCAAaatcataatatttttaaaaacaacaacaggaatgAGAATCACCAGCACATGCAAAAACTACATATGGAAttaggggggagggggggtgagaGGCAGGGATGGTAATGTATAAACAGATTCAACACAACAACAGAAGCAAATAAACTAAACGAACGAATGCACCAAGAAGACACTCGTGAAACTGTCTTTCTGCAGAGCCGGCTGAGCAGCAGGCAGTGGCAGTGCCCTCCGTTTCCACACGTCATAAGCACTGCAGGCCAGACAGACTGACGGACGCATtcaagacacagagacagacggacagGCCCCGCCGTCCAGCAACACTCCAGTCACTCCATGGGCAGGAGCTGAACTGCAGTGCTGCACACCCCCCCACGCTGCAGGAGAGTTTATACTAGCCTCACAGCTGCACCTGTGGCCTCTCTCCTTATAATGCAGAGGACTGGGCGTTAAAACAGTGTCTCTGTATGACAGATGTGCTGAAGCAGCTCTTAAGTCACTTGTGATTGCTCGTTTGACAACACAATCCACCCCCTGCCAGTGCTGCAGGAGGTCCTCCCAGCCTGGCCTGGACCTCAATCCCTCCCTGTAGTCACAGGAACTCCCATCACTCAGTGATCATatgatcataatcataatcactATACAGCAGTGTGGAGTCATGGTCAGTGCTCTGGTCCTGAGCAgagggttcagtcccaggtgtgGGACCCATGAGCAAGGCACTGtgcctagattgctccagtacaaacccagtggtataaatgggtaattgtatgtttaaataatgtaataaatgaatgtgaatCAATACTGACCTGTTCAGTTTTAAACTAGGCACTACGTGGTAGCAAAGCAATCAACTTTAagtctttaatacattttgccaGTTGTCAGGCATGGTTTCTTTTGCCCTGTCTGGAAAGCAGCAGAGAGCACGCCCAGGAGACACTGGCAGCAGATGGGCTGAGCTGAGGGGAGCGGCTTCACCTTTCTGTTAATTGTGTGAGCCTCTGTAACCTTTTGCCCAGCTCCTGCAAAGCAGCAGCGCTTCTACCTCCCTGTatctcagcagcacagcagcTCTGAAGCTATGACCAAACGGTGACCGAAGCTATCCATGCAGTATTCATGAGCTGAACTGCGATCTGGTCCCAGAGACGGACAGAGCCTCCCCCAGGGGTCAGGCCACCATGCAGACCGCTTCAGTGCACCACTCCCAGCACCCCTGTGCCGTGTCTATGCATCAGCCTGCATAGCATGGCTGCTGCGTTTACAAAGTGACAACACCTCTGTAACAGCCACAACAGGACAATAGGGTAGGCGctccattaaaaaacaagaactaaACAATGAACGAACAGTCCCCTCTGCTACTGTCATGGCACGTCATGTATCTTTCAGTAGCGAGTCACATGGTGCCATTGTCTTCTTATGCCATGCGATACACAGACAGATCTTACGGTCGGTGTCAATTTTCACAGCTGAGCCCCTGGCGCCACACTGACACAATGGGGTGACACAGGCACTGAGTGGTGGGAGGTGTAGAGAGTGTCTcctcaaaatatatatgaatatgcttatatatgtatgtgtgtgtttatatacacacacatata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29811 True 1795 lncRNA 0.49 2 18714671 18719794

Neighbor

gene id symbol gene type direction distance location
AMCG00007444 NA coding upstream 2425 18690011 ~ 18712246 (+)
AMCG00007439 megf11,LOC104967286 coding upstream 41529 18655566 ~ 18673142 (+)
AMCG00007440 NA coding upstream 91628 18621872 ~ 18623043 (+)
AMCG00007436 tipin coding upstream 92827 18619308 ~ 18621844 (+)
AMCG00007438 rl4a,rpl4,LOC106561854 coding upstream 118318 18590680 ~ 18596353 (+)
AMCG00007446 LOC101468289,LOC102208128,LOC106924056 coding downstream 30676 18750470 ~ 18790088 (+)
AMCG00007447 vwa9,LOC107583765 coding downstream 91061 18810855 ~ 18814928 (+)
AMCG00007450 NA coding downstream 155761 18875555 ~ 18896629 (+)
AMCG00007451 LOC107755062,LOC107700450 coding downstream 219471 18939265 ~ 18972204 (+)
AMCG00007453 NA coding downstream 312290 19032084 ~ 19047759 (+)
G23791 NA non-coding upstream 89612 18623921 ~ 18625059 (+)
G23782 NA non-coding upstream 125603 18588866 ~ 18589068 (+)
G23781 NA non-coding upstream 125981 18588016 ~ 18588690 (+)
G23780 NA non-coding upstream 128135 18586174 ~ 18586536 (+)
G23696 NA non-coding upstream 510310 18202462 ~ 18204361 (+)
G23887 NA non-coding downstream 284553 19004347 ~ 19087472 (+)
G23891 casc4 non-coding downstream 328292 19048086 ~ 19112325 (+)
G23886 NA non-coding downstream 360288 19080082 ~ 19083613 (+)
G24030 NA non-coding downstream 909510 19629304 ~ 19630607 (+)
G24040 NA non-coding downstream 930862 19650656 ~ 19650874 (+)
AMCG00007433 NA other upstream 144199 18567242 ~ 18570472 (+)
G23724 NA other upstream 422333 18290108 ~ 18292338 (+)
AMCG00007414 NA other upstream 489735 18217730 ~ 18224936 (+)
G23698 fem1b other upstream 506363 18207078 ~ 18208308 (+)
AMCG00007417 NA other upstream 512711 18198618 ~ 18201960 (+)
AMCG00007452 NA other downstream 287756 19007550 ~ 19014899 (+)
G23893 eif3j,eif3ja,LOC107688938,LOC107712512 other downstream 331183 19050977 ~ 19056133 (+)
AMCG00007483 NA other downstream 1219376 19939170 ~ 19951428 (+)
AMCG00007514 arpp19,LOC103358163,LOC105892485,LOC107740885,LOC107569706 other downstream 2340365 21060159 ~ 21066783 (+)
AMCG00007547 clg23h15orf48,clg1h15orf48,c13h15orf48 other downstream 3411779 22131573 ~ 22134714 (+)

Expression


Co-expression Network