G23813


Basic Information

Item Value
gene id G23813
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 18712077 ~ 18714368 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU29820
TTCCCCTTGAGCGCTGGAGACGTAAACAACAGGTGAAGCGTAACCTGGACTGAAAACTCGCACACACGctcgcactcacacacacacccactcacacacacacaccccgacCCGATTGACTCACCTAATGCAGCCTTGTATCGAATGATTGTCAATGTGTTATTGCTTCTAGAGTACATGTTCTGCATACCAAAAGTTGTGAAGCTGTTAAAACCACATTTTGGACCTGATTTAGATGTGATTTTGATCCGTTTTTTATCTTGGGTCCCTTGCCTCTCGGCcaaaaaagcagaacattttagAAAGGCTATTGACTGGAAGCTTAAAGGACCTTATGGTGCAAGTGGgtactgtcctgtcctgtcacTACAGCGTCCTGTCTGAGAGCAGCCAGTCTTCAGAGGTAAGGCAGTGCAGTGACGCCAGCAGTACACTCTGGCTGGAGTCTGTGGTAGACTGACTGGGAATTCAGAGTTACTGTGAAAAGCTGCAAAAAACAACGAGTTAAGTCATCCGAGCAGCATTCCCCTTAGTGCGCCCACTGCGTTGACTGCAGTATGTAGAGGTGCGTAGGGTAACACGGTGGGCTTCCACTGCGGGAATCCGGGGGAAGACTAATGGCAAACTGCACTCGAGTTTTAACACAACTGGCCCACAGGAGGAAAGGGTCTGTCATGCTGCAGGCGCTTACACTGGGATTTCACATTTCGGTCatgcttttctgtcttttattttattttatatttcagcgTTGCAGCTTTTCACTAACAAAATTCACTATCACTaccgtaaataaataaacaaattcaataaatacatacatcataaagaaatacataattgataatacaaaaacaaaacaggaagacccccccaacccccacctcATAGCAGTATCTTTAATAtgtaaaccattaaaaacaaatacagaagtCTAACCCCAGCTAGTTCCAGTATGGGTTTAAAATCAGTAAATAGGATCATTTCTTACTATTTCTTACAATTTAATCATGCTCAGTCACCAGGGGCTGGTGTCAGTGTGAAGGAAGAGAgtgggacagggagagggggggagagagagagagagagagagggagggaggttagggagagacagagggacggAGGGATAAACAGGTACCACAGCAGCTGGGATCTGTGGCAAAGTATTCGCTCAGACTGGGAGATGCCACAGGCACAGTCCCATGCAGCAGTGTCGTTCAGTCCTGGAGCAGCGGGATCGCACAGTCCCTGCCCCTCCGGCATCATGCCTCCGAATTCAGTCCCATATCGTCTCCAAGGCATAAATCCACGCTGACCTTGCTGTGGCCCCTCAACTCCCGGAGAGAGAGAGCCGTGCTGACAGACTGTCAAGTCTGCCACTGCTAACCCCGCCTGTGCCTCCAGCTGCTCCTGGtcctgtctgtttgtttgtttagaagGGCAGCTCAGGTGAGAGACTCTATCCACCGCCCCGCAGAGCCTCCATTACTCCCCAGCTCTAAACTTGAGTCCATTTAGTAGCTGCTTCCAGAAACACTTTACTCTGCCTttccaaagaaaacagaagaagaatCACAGTAAAAAGTACATAGCTGGTGTTTGTTCCTCCAGGCCCTGACTCTGGATCAACGAGGGAGCGTCTTTCACTAACTCTGCGATCAGCTCCAGCGGGTCTGTCCTGACGCCTCCTTCTGTGCGGTCAGGCAGGGGATGAGGACAGAAGAAGTAAAGAGCAGTGTCTCGCCCCAGGGGTGCTCTCCACATCGCCTCAGTCTTACACAGGAATAAAATCGTCATGCAGCAGTacagggagatggagagagagggagagaggggggggggagggacaGACTGCAATATTCTGCTCCAGTAATTTCTTTTGAaccttgttatttatttgtaattgatgtgtttttgttcgttctttttatatatatagatatatatacatacaccggcatttgttattattattgtccttCGCACACAGTTTCTTGCCTCCGCTCTGTCCCCTGTGTGTGCTAGGGTCACTGCTGCTAGAGATAGCTGGCTGGACAGTCCAGGTGTCCAGCTGACTGACCGAGGGCAGCAGAGCAGCGGGGGCCAGTGCGGGCCATCCTCTACGACTGGGTGCCGGGCGGGGCGTCCTCGGGTGGCGGGGAGTGGGCAGGGCTGTGGCGGACGGGCAGCAGGTCGTAGTGGCTGGGGATGTGGCTGTTGCGGGGCAGGTCGTAGGGGTTCTGAGGGTAGCTGGGCAGCACTCCGTTGGCACCCTGCAGCAGACTCACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29820 True 2292 lncRNA 0.50 1 18712077 18714368

Neighbor

gene id symbol gene type direction distance location
AMCG00007442 NA coding downstream 78108 18624723 ~ 18633969 (-)
AMCG00007441 map2k1 coding downstream 98131 18597275 ~ 18613946 (-)
AMCG00007443 NA coding downstream 121950 18584799 ~ 18590127 (-)
AMCG00007435 crybgx,LOC105906490,LOC103028443,LOC103368872,LOC107563446,LOC106562861 coding downstream 138957 18570568 ~ 18573120 (-)
AMCG00007434 NA coding downstream 208686 18496190 ~ 18503391 (-)
AMCG00007445 NA coding upstream 247 18714615 ~ 18733019 (-)
AMCG00007449 NA coding upstream 77210 18791578 ~ 18810571 (-)
AMCG00007448 NA coding upstream 101483 18815851 ~ 18823606 (-)
AMCG00007457 NA coding upstream 306352 19020720 ~ 19023092 (-)
AMCG00007455 NA coding upstream 309530 19023898 ~ 19025640 (-)
G23799 NA non-coding downstream 91346 18619285 ~ 18620731 (-)
G23745 NA non-coding downstream 308800 18314151 ~ 18403277 (-)
G23676 NA non-coding downstream 638072 18072055 ~ 18074005 (-)
G23663 NA non-coding downstream 649085 17972906 ~ 18062992 (-)
G23629 NA non-coding downstream 805669 17906101 ~ 17906408 (-)
G23839 NA non-coding upstream 63477 18777845 ~ 18778069 (-)
G23840 NA non-coding upstream 64803 18779171 ~ 18779608 (-)
G23842 NA non-coding upstream 66469 18780837 ~ 18781092 (-)
G23843 NA non-coding upstream 66846 18781214 ~ 18785137 (-)
G23854 NA non-coding upstream 115497 18829865 ~ 18830087 (-)
AMCG00007418 fem1b other downstream 504057 18202459 ~ 18208020 (-)
G23661 NA other downstream 653128 18055470 ~ 18058949 (-)
AMCG00007375 NA other downstream 2090172 16469467 ~ 16621905 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other downstream 2366497 16320997 ~ 16345580 (-)
AMCG00007366 NA other downstream 2398045 16237461 ~ 16314032 (-)
G23838 NA other upstream 61992 18776360 ~ 18777638 (-)
AMCG00007481 fam63b,LOC107750498 other upstream 1077333 19791701 ~ 19799752 (-)
AMCG00007487 NA other upstream 1200778 19915146 ~ 19923153 (-)
AMCG00007494 NA other upstream 1456961 20171329 ~ 20222004 (-)
G24217 NA other upstream 1617145 20331513 ~ 20331811 (-)

Expression


Co-expression Network