G24030


Basic Information

Item Value
gene id G24030
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 19629304 ~ 19630607 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU30099
TGGCCGCCCAGACTTCAGCGTAGAAACTCTGAACAGATCTTTGAATTTGCCACTTGGCCAGCGTCAGGATGTGGCAGGAGAGGGAGACGCTGAGTTCCTCTCCTCTTTGTGCCTTGCCTTTAAGAGCTAAAGCCATGATAGGTTCGGTTAAACATTAGTAGGCTTTacgaaaacatacatttattactACGACCAGTCGGGACGCTGCCATTGGCCTGAGCTGGGGttcacacgcacacagacacctCCTCCGCGGGGCAGATCAGTCTATTCTGCTCTTATGGAGACGGGACCAGGCGCAACAAGGACAACTTTTTTACAGGGGAGGTCTAAGAAACACGTAGAACCTGCAGCTTTGTAGAAGAACCGTTATAGATATTCGTTTTTTCCCACGTTTATTCCGCTGAAAAGGATTACAAGATGTTTTCCGTAAAACCTCTAAAACCCACTTTCAAATCCTACCTCCCTCCTTTGCAGACGGAGGTTAAGAGAAGTCCCCAGCCCACCATCAAGAAACTAGAGGCGAGATTGCTGCCAGGTGAGCTATACTGTCTTTGGATGAAGTGACAAATCTTGCAAGCAGTGTGGTACTGCAGTGTGGCAAAGGAAAATCGCACACTTTTAAAatttttaatgatatatttttatggaCACGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30099 True 656 lncRNA 0.46 2 19629304 19630607

Neighbor

gene id symbol gene type direction distance location
AMCG00007473 NA coding upstream 26345 19592421 ~ 19602959 (+)
AMCG00007472 mcee coding upstream 38404 19580414 ~ 19590900 (+)
AMCG00007468 LOC107595092 coding upstream 150215 19463556 ~ 19479089 (+)
AMCG00007469 fam189a1 coding upstream 177835 19442457 ~ 19451469 (+)
AMCG00007467 NA coding upstream 290315 19303109 ~ 19338989 (+)
AMCG00007476 myo1e,LOC102792200,LOC103362848 coding downstream 36194 19666801 ~ 19714103 (+)
AMCG00007478 sltm,LOC106587340 coding downstream 149970 19780577 ~ 19792758 (+)
AMCG00007482 adam10,LOC101172489,LOC108428395,LOC106587342,LOC107704208 coding downstream 250461 19881068 ~ 19910112 (+)
AMCG00007488 aldh1a2 coding downstream 348333 19978940 ~ 19992609 (+)
AMCG00007497 NA coding downstream 607232 20237839 ~ 20251499 (+)
G23891 casc4 non-coding upstream 516979 19048086 ~ 19112325 (+)
G23887 NA non-coding upstream 541832 19004347 ~ 19087472 (+)
G23886 NA non-coding upstream 545691 19080082 ~ 19083613 (+)
G23804 NA non-coding upstream 909510 18714671 ~ 18719794 (+)
G23791 NA non-coding upstream 1004245 18623921 ~ 18625059 (+)
G24040 NA non-coding downstream 20049 19650656 ~ 19650874 (+)
G24083 NA non-coding downstream 168878 19799485 ~ 19799952 (+)
G24085 NA non-coding downstream 172246 19802853 ~ 19803466 (+)
G24088 NA non-coding downstream 185188 19815795 ~ 19818345 (+)
G24156 NA non-coding downstream 431366 20061973 ~ 20091627 (+)
G23893 eif3j,eif3ja,LOC107688938,LOC107712512 other upstream 573171 19050977 ~ 19056133 (+)
AMCG00007452 NA other upstream 614405 19007550 ~ 19014899 (+)
AMCG00007433 NA other upstream 1058832 18567242 ~ 18570472 (+)
G23724 NA other upstream 1336966 18290108 ~ 18292338 (+)
AMCG00007414 NA other upstream 1404368 18217730 ~ 18224936 (+)
AMCG00007483 NA other downstream 308563 19939170 ~ 19951428 (+)
AMCG00007514 arpp19,LOC103358163,LOC105892485,LOC107740885,LOC107569706 other downstream 1429552 21060159 ~ 21066783 (+)
AMCG00007547 clg23h15orf48,clg1h15orf48,c13h15orf48 other downstream 2500966 22131573 ~ 22134714 (+)
AMCG00007554 cdc42se2,LOC107710816,LOC107577486 other downstream 2558638 22189245 ~ 22203951 (+)
AMCG00007553 NA other downstream 2632913 22263520 ~ 22266409 (+)

Expression


Co-expression Network