G24085


Basic Information

Item Value
gene id G24085
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 19802853 ~ 19803466 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU30169
CTGGGCATCACACAGACTGAGACAGAGGCTCTGGCAGCAGGCAGGCACTCATGGGTGTTTTGCAGGTATAACAGAATTATTTTGTTGTGGGGGATGCATATTTCAGTTTGGCAGGGGTCTTGAAGCATTTTAAACCAAATTAATCCTGACCAGCAGAGCACACCTGGAGCCACTCACCTGCGGGTCGACGAGCCAGCCGTGGTACAGTGGGATGTCGAGCAGGTCGAAAACTATGCACTCGGGCGTGTACTCGAAGACACGCACTCCCGTAAACCTTACATTGACATCCAGCCCCGTCTGCAACTTGTGCAGCACAGCCATGGCATCACTCATGTTCTGCAAGAGAGCAAATGCACTGTTAAAATTTGTGAACCCACACacgcaatcacacacacacaaacacacacgtttAACTGGGCTCATTGTGTACACAAGCTCCTTATGGTGATGTAACCCCCCTGTGAAATCAGTAGAGCATTAAAACCTCCCCCCGCGTGTCAGGCTTATCACcctactgggtggagctgtgtggtgtGGAACTCGAGGGAAGATCTGTGGGGAGAATCCCAAGTGGGGAGCTCCCACCTGCATAAGCTACACATGCTCCATATGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30169 True 614 lncRNA 0.51 1 19802853 19803466

Neighbor

gene id symbol gene type direction distance location
AMCG00007478 sltm,LOC106587340 coding upstream 10095 19780577 ~ 19792758 (+)
AMCG00007476 myo1e,LOC102792200,LOC103362848 coding upstream 88750 19666801 ~ 19714103 (+)
AMCG00007473 NA coding upstream 199894 19592421 ~ 19602959 (+)
AMCG00007472 mcee coding upstream 211953 19580414 ~ 19590900 (+)
AMCG00007468 LOC107595092 coding upstream 323764 19463556 ~ 19479089 (+)
AMCG00007482 adam10,LOC101172489,LOC108428395,LOC106587342,LOC107704208 coding downstream 77602 19881068 ~ 19910112 (+)
AMCG00007488 aldh1a2 coding downstream 175474 19978940 ~ 19992609 (+)
AMCG00007497 NA coding downstream 434373 20237839 ~ 20251499 (+)
AMCG00007495 NA coding downstream 464694 20268160 ~ 20275806 (+)
AMCG00007496 LOC100538179,LOC107571204,LOC107741823 coding downstream 522010 20325476 ~ 20335371 (+)
G24083 NA non-coding upstream 2901 19799485 ~ 19799952 (+)
G24040 NA non-coding upstream 151979 19650656 ~ 19650874 (+)
G24030 NA non-coding upstream 172246 19629304 ~ 19630607 (+)
G23891 casc4 non-coding upstream 690528 19048086 ~ 19112325 (+)
G23887 NA non-coding upstream 715381 19004347 ~ 19087472 (+)
G24088 NA non-coding downstream 12329 19815795 ~ 19818345 (+)
G24156 NA non-coding downstream 258507 20061973 ~ 20091627 (+)
G24167 NA non-coding downstream 301254 20104720 ~ 20105070 (+)
G24202 NA non-coding downstream 452680 20256146 ~ 20256402 (+)
G24205 NA non-coding downstream 461927 20265393 ~ 20265614 (+)
G23893 eif3j,eif3ja,LOC107688938,LOC107712512 other upstream 746720 19050977 ~ 19056133 (+)
AMCG00007452 NA other upstream 787954 19007550 ~ 19014899 (+)
AMCG00007433 NA other upstream 1232381 18567242 ~ 18570472 (+)
G23724 NA other upstream 1510515 18290108 ~ 18292338 (+)
AMCG00007414 NA other upstream 1577917 18217730 ~ 18224936 (+)
AMCG00007483 NA other downstream 135704 19939170 ~ 19951428 (+)
AMCG00007514 arpp19,LOC103358163,LOC105892485,LOC107740885,LOC107569706 other downstream 1256693 21060159 ~ 21066783 (+)
AMCG00007547 clg23h15orf48,clg1h15orf48,c13h15orf48 other downstream 2328107 22131573 ~ 22134714 (+)
AMCG00007554 cdc42se2,LOC107710816,LOC107577486 other downstream 2385779 22189245 ~ 22203951 (+)
AMCG00007553 NA other downstream 2460054 22263520 ~ 22266409 (+)

Expression


Co-expression Network