G24220


Basic Information

Item Value
gene id G24220
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 20344085 ~ 20344387 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU30347
cccctgtctgccttgaaatttctgcctgggagagaccttgctgatgcagtataactaccttgtgtcttgttgctgtgctcagtcttgccatggtgtatgacttttgacagtaaactgtcttcagcaacctcaccttgttagctgagtttggctgttcctcacccagttttattcctcctacacagctgtttctgtttcagttaatgattgtgtttcaacctacatattgaattgatgatcattagcacctgtttggtataattgtttaatcatacgcctgactatatgcctacaaaatccctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30347 True 303 lncRNA 0.42 1 20344085 20344387

Neighbor

gene id symbol gene type direction distance location
AMCG00007496 LOC100538179,LOC107571204,LOC107741823 coding upstream 8714 20325476 ~ 20335371 (+)
AMCG00007495 NA coding upstream 68279 20268160 ~ 20275806 (+)
AMCG00007497 NA coding upstream 92586 20237839 ~ 20251499 (+)
AMCG00007488 aldh1a2 coding upstream 351476 19978940 ~ 19992609 (+)
AMCG00007482 adam10,LOC101172489,LOC108428395,LOC106587342,LOC107704208 coding upstream 433973 19881068 ~ 19910112 (+)
AMCG00007499 nedd4,LOC103371920,LOC102785817 coding downstream 26827 20371214 ~ 20385040 (+)
AMCG00007498 LOC106596491 coding downstream 70977 20415364 ~ 20428546 (+)
AMCG00007501 NA coding downstream 97116 20441503 ~ 20446920 (+)
AMCG00007509 NA coding downstream 116872 20461259 ~ 20462953 (+)
AMCG00007506 NA coding downstream 122339 20466726 ~ 20470825 (+)
G24212 NA non-coding upstream 4282 20337321 ~ 20339803 (+)
G24205 NA non-coding upstream 78471 20265393 ~ 20265614 (+)
G24202 NA non-coding upstream 87683 20256146 ~ 20256402 (+)
G24167 NA non-coding upstream 239015 20104720 ~ 20105070 (+)
G24156 NA non-coding upstream 252458 20061973 ~ 20091627 (+)
G24252 NA non-coding downstream 142758 20487145 ~ 20487683 (+)
G24253 NA non-coding downstream 143418 20487805 ~ 20488377 (+)
G24254 NA non-coding downstream 144144 20488531 ~ 20489202 (+)
G24255 NA non-coding downstream 144910 20489297 ~ 20489756 (+)
G24258 NA non-coding downstream 148009 20492396 ~ 20492617 (+)
AMCG00007483 NA other upstream 392657 19939170 ~ 19951428 (+)
G23893 eif3j,eif3ja,LOC107688938,LOC107712512 other upstream 1287952 19050977 ~ 19056133 (+)
AMCG00007452 NA other upstream 1329186 19007550 ~ 19014899 (+)
AMCG00007433 NA other upstream 1773613 18567242 ~ 18570472 (+)
G23724 NA other upstream 2051747 18290108 ~ 18292338 (+)
AMCG00007514 arpp19,LOC103358163,LOC105892485,LOC107740885,LOC107569706 other downstream 715772 21060159 ~ 21066783 (+)
AMCG00007547 clg23h15orf48,clg1h15orf48,c13h15orf48 other downstream 1787186 22131573 ~ 22134714 (+)
AMCG00007554 cdc42se2,LOC107710816,LOC107577486 other downstream 1844858 22189245 ~ 22203951 (+)
AMCG00007553 NA other downstream 1919133 22263520 ~ 22266409 (+)
G24606 NA other downstream 1937313 22281700 ~ 22282958 (+)

Expression


Co-expression Network