G24253


Basic Information

Item Value
gene id G24253
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 20487805 ~ 20488377 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU30394
GCACAGATCATTCAGTATTGCTCCAGCAGTGGGCGCTCTGCCACCCACTGAGCAGCGGCACATTCCTGATTCCACAGACCACTGCACTCAACCTCCTATACAGGTAAGCCAGAGGAAATGTTTCTTCTGGAAATATACAGCACTATAAACTAAAGATTTCATGCAGGTCTTGCACATGCTGGGGACTACTTTTCAGCActacaaaatcaaatgtatttttatatacaattgtCCAAATAAAACGTTATTTTTATCAACCCTCCCACCCCCATTTGCTTAGCAATACATGTTGAGGTGCGATGACGGCTGTCGTCAGAAGTTCATTTGGCTTGACTGGCGTGTTCCTAAACTGAAAAAGTTATGGATAGGACAGAACAGTGTGTGCTTCCTACCTTTTCCAACACGTCAAAAAAGACTAGGTGGCTGGGCAGTGCGGCCTTGGTGTGCAGCATGGTGTTCAGCCAACCTTCTGGGTCGGAGAAGAACAACTCGGCTTCATCCACGTAACTTTTGTTCCCAGTCAGGTCAGGAGGACACTGTagaaactgcattttcaaaGGACAGTGGACGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30394 True 573 lncRNA 0.46 1 20487805 20488377

Neighbor

gene id symbol gene type direction distance location
AMCG00007505 NA coding upstream 767 20472817 ~ 20487038 (+)
AMCG00007506 NA coding upstream 16980 20466726 ~ 20470825 (+)
AMCG00007509 NA coding upstream 24852 20461259 ~ 20462953 (+)
AMCG00007501 NA coding upstream 40885 20441503 ~ 20446920 (+)
AMCG00007498 LOC106596491 coding upstream 59259 20415364 ~ 20428546 (+)
AMCG00007504 rab27a,LOC106587426,LOC106562223 coding downstream 16522 20504899 ~ 20512359 (+)
AMCG00007503 rsl24d1,LOC105018348 coding downstream 25356 20513733 ~ 20518119 (+)
AMCG00007512 onecut1,LOC107676486,LOC107746960,LOC107712763 coding downstream 511637 21000014 ~ 21009567 (+)
AMCG00007513 fam214a coding downstream 560542 21048919 ~ 21056851 (+)
AMCG00007516 myo5aa,myo5a,LOC107746947 coding downstream 597609 21085986 ~ 21125981 (+)
G24252 NA non-coding upstream 122 20487145 ~ 20487683 (+)
G24220 NA non-coding upstream 143418 20344085 ~ 20344387 (+)
G24212 NA non-coding upstream 148002 20337321 ~ 20339803 (+)
G24205 NA non-coding upstream 222191 20265393 ~ 20265614 (+)
G24202 NA non-coding upstream 231403 20256146 ~ 20256402 (+)
G24254 NA non-coding downstream 154 20488531 ~ 20489202 (+)
G24255 NA non-coding downstream 920 20489297 ~ 20489756 (+)
G24258 NA non-coding downstream 4019 20492396 ~ 20492617 (+)
G24256 NA non-coding downstream 4527 20492904 ~ 20494005 (+)
G24310 NA non-coding downstream 388207 20876584 ~ 20876785 (+)
AMCG00007483 NA other upstream 536377 19939170 ~ 19951428 (+)
G23893 eif3j,eif3ja,LOC107688938,LOC107712512 other upstream 1431672 19050977 ~ 19056133 (+)
AMCG00007452 NA other upstream 1472906 19007550 ~ 19014899 (+)
AMCG00007433 NA other upstream 1917333 18567242 ~ 18570472 (+)
G23724 NA other upstream 2195467 18290108 ~ 18292338 (+)
AMCG00007514 arpp19,LOC103358163,LOC105892485,LOC107740885,LOC107569706 other downstream 571782 21060159 ~ 21066783 (+)
AMCG00007547 clg23h15orf48,clg1h15orf48,c13h15orf48 other downstream 1643196 22131573 ~ 22134714 (+)
AMCG00007554 cdc42se2,LOC107710816,LOC107577486 other downstream 1700868 22189245 ~ 22203951 (+)
AMCG00007553 NA other downstream 1775143 22263520 ~ 22266409 (+)
G24606 NA other downstream 1793323 22281700 ~ 22282958 (+)

Expression


Co-expression Network