G24258


Basic Information

Item Value
gene id G24258
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 20492396 ~ 20492617 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU30401
GCTCGTGTTCTTTTGTATacagttttgattttcttttcctcagcTTCACTGGCTCTGAAAATGCAGACTTTCTGTTTAGGAAAAGACGGGCCCTAAttctttccatctctctttGGGAAACCGGTTTCTCGATAGTACACAACCATTACATGATGTCAACAGACGTGCTGTGCTCTGCTTGCTGCCGTTTGTATTGTGTTGGTACCATGTTTGGACAGAAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30401 True 222 lncRNA 0.43 1 20492396 20492617

Neighbor

gene id symbol gene type direction distance location
AMCG00007505 NA coding upstream 5358 20472817 ~ 20487038 (+)
AMCG00007506 NA coding upstream 21571 20466726 ~ 20470825 (+)
AMCG00007509 NA coding upstream 29443 20461259 ~ 20462953 (+)
AMCG00007501 NA coding upstream 45476 20441503 ~ 20446920 (+)
AMCG00007498 LOC106596491 coding upstream 63850 20415364 ~ 20428546 (+)
AMCG00007504 rab27a,LOC106587426,LOC106562223 coding downstream 12282 20504899 ~ 20512359 (+)
AMCG00007503 rsl24d1,LOC105018348 coding downstream 21116 20513733 ~ 20518119 (+)
AMCG00007512 onecut1,LOC107676486,LOC107746960,LOC107712763 coding downstream 507397 21000014 ~ 21009567 (+)
AMCG00007513 fam214a coding downstream 556302 21048919 ~ 21056851 (+)
AMCG00007516 myo5aa,myo5a,LOC107746947 coding downstream 593369 21085986 ~ 21125981 (+)
G24255 NA non-coding upstream 2640 20489297 ~ 20489756 (+)
G24254 NA non-coding upstream 3194 20488531 ~ 20489202 (+)
G24253 NA non-coding upstream 4019 20487805 ~ 20488377 (+)
G24252 NA non-coding upstream 4713 20487145 ~ 20487683 (+)
G24220 NA non-coding upstream 148009 20344085 ~ 20344387 (+)
G24256 NA non-coding downstream 287 20492904 ~ 20494005 (+)
G24310 NA non-coding downstream 383967 20876584 ~ 20876785 (+)
G24311 NA non-coding downstream 387929 20880546 ~ 20880924 (+)
G24384 NA non-coding downstream 893608 21386225 ~ 21398047 (+)
G24570 NA non-coding downstream 1652222 22144839 ~ 22148238 (+)
AMCG00007483 NA other upstream 540968 19939170 ~ 19951428 (+)
G23893 eif3j,eif3ja,LOC107688938,LOC107712512 other upstream 1436263 19050977 ~ 19056133 (+)
AMCG00007452 NA other upstream 1477497 19007550 ~ 19014899 (+)
AMCG00007433 NA other upstream 1921924 18567242 ~ 18570472 (+)
G23724 NA other upstream 2200058 18290108 ~ 18292338 (+)
AMCG00007514 arpp19,LOC103358163,LOC105892485,LOC107740885,LOC107569706 other downstream 567542 21060159 ~ 21066783 (+)
AMCG00007547 clg23h15orf48,clg1h15orf48,c13h15orf48 other downstream 1638956 22131573 ~ 22134714 (+)
AMCG00007554 cdc42se2,LOC107710816,LOC107577486 other downstream 1696628 22189245 ~ 22203951 (+)
AMCG00007553 NA other downstream 1770903 22263520 ~ 22266409 (+)
G24606 NA other downstream 1789083 22281700 ~ 22282958 (+)

Expression


Co-expression Network