G24311


Basic Information

Item Value
gene id G24311
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 20880546 ~ 20880924 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU30470
CCATTAGAACTGTAGTCATCTCCTAGATCTTTAAGTATAAAAGGGGTATTTATCGTTTGGAAAAACTAGTTAAATGGAAGTGTTGGTCTCCAAGTGCCAAAGTGCAGCCTGCCTGTTATTGTGTTCTCAATCCTTGTTCAGACTGTCACACAATATAACCTCTTATTCTACACTACTcaaacaaattaatggaaaactTAAATCACAAATCAGATCTcaatgaacgaaatatattaaagatcaaaatctttactgtacattgtgtaattcattgagaacaaaattacctaacaacagtcaatggaaaccaaaatcacccaccattgagggctggattcaaactcacactgaaaatcaaagtaaacaattgaaatcacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30470 True 379 lncRNA 0.34 1 20880546 20880924

Neighbor

gene id symbol gene type direction distance location
AMCG00007503 rsl24d1,LOC105018348 coding upstream 362427 20513733 ~ 20518119 (+)
AMCG00007504 rab27a,LOC106587426,LOC106562223 coding upstream 368187 20504899 ~ 20512359 (+)
AMCG00007505 NA coding upstream 393508 20472817 ~ 20487038 (+)
AMCG00007506 NA coding upstream 409721 20466726 ~ 20470825 (+)
AMCG00007509 NA coding upstream 417593 20461259 ~ 20462953 (+)
AMCG00007512 onecut1,LOC107676486,LOC107746960,LOC107712763 coding downstream 119090 21000014 ~ 21009567 (+)
AMCG00007513 fam214a coding downstream 167995 21048919 ~ 21056851 (+)
AMCG00007516 myo5aa,myo5a,LOC107746947 coding downstream 205062 21085986 ~ 21125981 (+)
AMCG00007518 myo5c coding downstream 250316 21131240 ~ 21146416 (+)
AMCG00007519 NA coding downstream 270653 21151577 ~ 21159558 (+)
G24310 NA non-coding upstream 3761 20876584 ~ 20876785 (+)
G24256 NA non-coding upstream 386541 20492904 ~ 20494005 (+)
G24258 NA non-coding upstream 387929 20492396 ~ 20492617 (+)
G24255 NA non-coding upstream 390790 20489297 ~ 20489756 (+)
G24254 NA non-coding upstream 391344 20488531 ~ 20489202 (+)
G24384 NA non-coding downstream 505301 21386225 ~ 21398047 (+)
G24570 NA non-coding downstream 1263915 22144839 ~ 22148238 (+)
G24654 NA non-coding downstream 1459812 22340736 ~ 22343616 (+)
G24692 NA non-coding downstream 1569183 22450107 ~ 22450404 (+)
G24693 NA non-coding downstream 1572892 22453816 ~ 22454055 (+)
AMCG00007483 NA other upstream 929118 19939170 ~ 19951428 (+)
G23893 eif3j,eif3ja,LOC107688938,LOC107712512 other upstream 1824413 19050977 ~ 19056133 (+)
AMCG00007452 NA other upstream 1865647 19007550 ~ 19014899 (+)
AMCG00007433 NA other upstream 2310074 18567242 ~ 18570472 (+)
G23724 NA other upstream 2588208 18290108 ~ 18292338 (+)
AMCG00007514 arpp19,LOC103358163,LOC105892485,LOC107740885,LOC107569706 other downstream 179235 21060159 ~ 21066783 (+)
AMCG00007547 clg23h15orf48,clg1h15orf48,c13h15orf48 other downstream 1250649 22131573 ~ 22134714 (+)
AMCG00007554 cdc42se2,LOC107710816,LOC107577486 other downstream 1308321 22189245 ~ 22203951 (+)
AMCG00007553 NA other downstream 1382596 22263520 ~ 22266409 (+)
G24606 NA other downstream 1400776 22281700 ~ 22282958 (+)

Expression


Co-expression Network