G24700


Basic Information

Item Value
gene id G24700
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 22460469 ~ 22461463 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU30990
CTTGATTTCTTCAGCGGCGCTCGATATCTGGGTCACACTATGATCCTTGTGGGGTCCGAAGAGCTTTTGGAAAGCCCTGATTGGGGTTTTACagtcaatacaaaacacatcagGAGGCTCGTTCTCATCACCACCTGCTGCCTTATGCTGCTCCTCCATCTCTGTGTCGCCTTTCTCATCGACTGGTGGATCTTCTTGGCTTTCTTCAGAATATTTGAACTCTTGCAGCCTTGCCTTTGTGGGCATCTCTGACCTTGTGAAATGCATCTTGTCCTCTTCGAACACCTCTTCGCTGCCCTGCTCTTGCACAACAAAATGCCTGAGTGGCTGAGGCTCGTCTTCATAAGATGGGTTGTAGGATTCGAAGCATAAGGACTCGTTTGTTTCCACAGAGAAATGCTGACCAGTGGATGCTGGTTGACAGATCCTTCCTATCTCCTCTTCCAAATCCAGCCTTTCTGGTTGACTGCTGGCAGTCTGTTCCACTTCCTTGTTCCAGCCTTTGCCAGCCagctcttttttcctttctgttacTAAAATGTACGGCTCTTGGGTGGGGAACTCAGTGTCAATTTCTTCCTTGTCATCCCACACCCCGTATTGCTTAGCCATTTCAGTCACCTCTGCTGTGTACAGAtcatattcttcttcttctgttctttGAGCTCTTTCTAAGGGACTCATGGTTGGGGTGAACTGGTCATCTTCTGTTCTGCTCACAACCACCTCCTCTGTGAATATGTCTAACCTTTCCCGTGACTCGTAGAGGTCCATGTTATAAAAACTGAGACCTTCAAGCTCTACATTGGTAGTGTCGGTGAGCACAGGTGTATCTACAGATGCCTTACTCAGGATGCCATCTCCTCCACCGAAGATGAACTCCTTAGTGGCCCCATCAGAAGCTGACCTGGAAGGGCCGGATATTTCACCTTTGGTTGCCATTGCTCTGAAAGGCAGCAGTACTGCAACAAGGTTGGTCTTCAAAACCTCAAGAG

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU30990 True 995 lncRNA 0.48 1 22460469 22461463

Neighbor

gene id symbol gene type direction distance location
AMCG00007563 LOC106587918,LOC106592744,LOC104942123 coding upstream 11515 22441995 ~ 22448954 (+)
AMCG00007562 pde8a,LOC100690151,LOC102210709,LOC105889152,LOC101463592 coding upstream 28624 22408928 ~ 22431845 (+)
AMCG00007561 gatm,LOC106595761 coding upstream 96275 22353612 ~ 22364194 (+)
AMCG00007559 NA coding upstream 129004 22322724 ~ 22331465 (+)
AMCG00007560 gabpb1 coding upstream 153210 22296054 ~ 22307259 (+)
AMCG00007569 NA coding downstream 1643 22463106 ~ 22474401 (+)
AMCG00007567 NA coding downstream 57033 22518496 ~ 22520287 (+)
AMCG00007570 NA coding downstream 75422 22536885 ~ 22549409 (+)
AMCG00007568 tm6sf1 coding downstream 91227 22552690 ~ 22560767 (+)
AMCG00007575 NA coding downstream 215583 22677046 ~ 22685708 (+)
G24699 NA non-coding upstream 156 22459884 ~ 22460313 (+)
G24698 NA non-coding upstream 952 22459020 ~ 22459517 (+)
G24695 NA non-coding upstream 3708 22455266 ~ 22456761 (+)
G24693 NA non-coding upstream 6414 22453816 ~ 22454055 (+)
G24692 NA non-coding upstream 10065 22450107 ~ 22450404 (+)
G24701 NA non-coding downstream 661 22462124 ~ 22462552 (+)
G24742 NA non-coding downstream 120006 22581469 ~ 22583154 (+)
G24793 NA non-coding downstream 492146 22953609 ~ 22954842 (+)
G24856 NA non-coding downstream 821225 23282688 ~ 23285015 (+)
G24897 NA non-coding downstream 944496 23405959 ~ 23406837 (+)
G24606 NA other upstream 177511 22281700 ~ 22282958 (+)
AMCG00007553 NA other upstream 194060 22263520 ~ 22266409 (+)
AMCG00007554 cdc42se2,LOC107710816,LOC107577486 other upstream 256518 22189245 ~ 22203951 (+)
AMCG00007547 clg23h15orf48,clg1h15orf48,c13h15orf48 other upstream 325755 22131573 ~ 22134714 (+)
AMCG00007514 arpp19,LOC103358163,LOC105892485,LOC107740885,LOC107569706 other upstream 1393686 21060159 ~ 21066783 (+)
AMCG00007585 star5,stard5,LOC104953929 other downstream 672348 23133811 ~ 23139521 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other downstream 727997 23189460 ~ 23193521 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other downstream 1196387 23657850 ~ 23670079 (+)
AMCG00007631 NA other downstream 1730758 24192221 ~ 24194481 (+)
AMCG00007640 NA other downstream 2015024 24476487 ~ 24499650 (+)

Expression


Co-expression Network