G24897


Basic Information

Item Value
gene id G24897
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 23405959 ~ 23406837 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU31242
GTAATAATTGTAAAGGTTAATTCAAAGAATTGTCCTAACAGATATCAAATGAAATCCACACATTTGAAAATTGTAACACGTTATGTACAATACCgcttttcattgttttagaGATTGCgaacaaaaagttatttgcatTCCTCTGCGCACACGAACATCAGTTCAGCCCTGttacaacacaattacaaatcaATTCAAGTTTCATAGTGCATTGTGGAAAGTTATTCTCAAAATCAACCACTAAGTTTTGCCTCCTCTTTACCACACTGCATAAAACTGAAGAAATACATGCTTGCGAGAAGTGCTGGGTTTCCTGGAATAAATTCTaccaatacatacaaacatggATTAATAATCTGGTCACTTTACATTAGGTTTGGCCTGgttataattttatttccaattcCATCTAAGGTTACCAACTCTCAATAGATGTTGTCTAGGAGGATTGTTCACCAAATGACTACAAGGACTGACCCACTAGCAATGTAAAACTTCCAGGGGGGGGGCTATGAAATCCATTGTAGATTAGAATCAAGGTAAAAGCTAGTGTTAGTCAGTGTTTGTGGTTAGTCCATGGGTTGAAGTACAAGAAAAATGAGAATGCACCCTTGTTATAGTGATGGATTTTGCTAATGGTGGGATGGTATCATGGTTACAATAAGGGATTCAGAAACCCAATTGATAAAGACAAGCAATGGCCAGAACCCCCAACCATAGACAACAAGAATATCAAATATCCCTAATATTATTGTAACTATGCTTAAAGGGAGCTTTAATCCCAACTCCAACCCAAgattctgcaaataaataaaatactaaggATTTGGAAATCAATTTGAAGAGTTGTTCGATTAAGTTTAAAATGGAGATCACACT

Function

GO:

id name namespace
GO:0006633 fatty acid biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31242 True 879 lncRNA 0.36 1 23405959 23406837

Neighbor

gene id symbol gene type direction distance location
AMCG00007598 NA coding upstream 18119 23387661 ~ 23387840 (+)
AMCG00007589 mesdc2,LOC107591313 coding upstream 203190 23199152 ~ 23202769 (+)
AMCG00007586 tmc3,LOC107736984,LOC107553743,LOC107373975 coding upstream 273685 23116851 ~ 23132274 (+)
AMCG00007580 mex3b,LOC107662268,LOC107709501,LOC107584525,LOC107685193,LOC107736985,LOC107553747 coding upstream 452441 22950692 ~ 22953518 (+)
AMCG00007581 LOC106562675,LOC102798863 coding upstream 485208 22906458 ~ 22920751 (+)
AMCG00007593 NA coding downstream 15179 23422016 ~ 23431721 (+)
AMCG00007605 aldh1a3,LOC106562593 coding downstream 286405 23693242 ~ 23708772 (+)
AMCG00007606 lrrk1,LOC106593346,LOC106591281,LOC106562602,LOC106593412 coding downstream 306346 23713183 ~ 23759994 (+)
AMCG00007612 NA coding downstream 498366 23905203 ~ 23919949 (+)
AMCG00007614 NA coding downstream 535874 23942711 ~ 23960914 (+)
G24856 NA non-coding upstream 120944 23282688 ~ 23285015 (+)
G24793 NA non-coding upstream 451117 22953609 ~ 22954842 (+)
G24742 NA non-coding upstream 822805 22581469 ~ 22583154 (+)
G24701 NA non-coding upstream 943407 22462124 ~ 22462552 (+)
G24700 NA non-coding upstream 944496 22460469 ~ 22461463 (+)
G24898 NA non-coding downstream 147 23406984 ~ 23425440 (+)
G24992 pcsk6 non-coding downstream 438667 23845504 ~ 23851902 (+)
G24997 NA non-coding downstream 453845 23860682 ~ 23863793 (+)
G25011 NA non-coding downstream 515083 23921920 ~ 23923225 (+)
G25013 NA non-coding downstream 517402 23924239 ~ 23926154 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 212438 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 266438 23133811 ~ 23139521 (+)
G24606 NA other upstream 1123001 22281700 ~ 22282958 (+)
AMCG00007553 NA other upstream 1139550 22263520 ~ 22266409 (+)
AMCG00007554 cdc42se2,LOC107710816,LOC107577486 other upstream 1202008 22189245 ~ 22203951 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other downstream 251013 23657850 ~ 23670079 (+)
AMCG00007631 NA other downstream 785384 24192221 ~ 24194481 (+)
AMCG00007640 NA other downstream 1069650 24476487 ~ 24499650 (+)
G25822 NA other downstream 4676985 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 5031807 28438644 ~ 28454707 (+)

Expression


Co-expression Network