G25011


Basic Information

Item Value
gene id G25011
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 23921920 ~ 23923225 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU31372
tacacaACTATTGTTTACTGCAAATATGCacactgaataattaaaaaaatctgggTTTTCCAGTCTTATTtctattataattttaatatggTATGTTAATATACCAGTGACTTAAATCCATAAGCAAATTACAACTGCATACAAAAATACTTGAAACTAAGGTTTTCCTGTTCAGCATTGAGTCAAACTGACGTGGGGTCCAAACctacaaaacagaaattgaaagTACCATATACAGTGGGCAGTTTGGTCAACCATAAATCTATTGTTACTAATCCATGactgatgcatttattttctttaaatgttactttttgtatatttacaacACAATGTTTTCGTGTGAAACAGAAAAGAGATCAATGgcacttaatatatatatatatattaaataaatgaaaaaggctacatttagaaatatataaacaaaaatccaTCATATTCCAGTTTTAACAAATTTTTAATAATCCAGGTATTGTAAGGAAGAGGTGATGTAAAGAAATATGGGGTGTTTCTACCacattgcttattttaaaaataatatacaatgaCACCCCTCTTCTGGGTTTTGACTGGAAATAATGAATTCAAACAAACTCCTGCAGTCTTTACTTTTATAATGGAAACCAGTCACTGGGTCTGAACATGTTAGTAAAAATACATGttgtaaatacattgtacagACAAGAGGGTTTTAACTATAATAATTACTTTGATATGAGTAAGTGAGTAAGTGAACTTTCATAGCCTTTTTATAGGTCTGTAAGCACTGCTGATGATTTACACTGTACAGGTGTCCACAATATAGCAAGCTTTATAGTTGTACATGTTTTgtatcattcttttttttcttgaactCGTTTGGATAAAGTTTCTATTtgcaaattaacaaattaacatttacaattttagtcatagttatttattttaacaaattgtattaataactattttgaaaaatataacgTAGCAGATAAAAGTTAAATTGATAGATTATgagagattgttttttaataaattgaataatgtagTATCGTAATCATGTGCAGTGTGAATCATTTTCACATCTGTCTTCCTGACTGAAGAGAATTGACTGATTTGGTTTGTTACCTGAACACATTTTGGTTTTAGGACTGGATTTGGGGGGCATAAATGGactgacattttcattaaacCTTGTCTGATGTCTAATTTTATAAGTTATTATCTATCTTGGAAAGAACAAACATTTATGAAATCTGACTTTTTAGTTTATTGAATTTTCAGTtataacatacactcacctaaaggattattaggaacacct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31372 True 1306 lncRNA 0.29 1 23921920 23923225

Neighbor

gene id symbol gene type direction distance location
AMCG00007612 NA coding upstream 1971 23905203 ~ 23919949 (+)
AMCG00007606 lrrk1,LOC106593346,LOC106591281,LOC106562602,LOC106593412 coding upstream 161926 23713183 ~ 23759994 (+)
AMCG00007605 aldh1a3,LOC106562593 coding upstream 213148 23693242 ~ 23708772 (+)
AMCG00007593 NA coding upstream 490199 23422016 ~ 23431721 (+)
AMCG00007598 NA coding upstream 534080 23387661 ~ 23387840 (+)
AMCG00007614 NA coding downstream 19486 23942711 ~ 23960914 (+)
AMCG00007613 clpx,LOC107737000,LOC107594724 coding downstream 46616 23969841 ~ 23977600 (+)
AMCG00007617 NA coding downstream 56189 23979414 ~ 23985768 (+)
AMCG00007616 ubap1l,ubap1lb,LOC106562636,LOC106587705,LOC107685210 coding downstream 64521 23987746 ~ 23994665 (+)
AMCG00007619 NA coding downstream 74212 23997437 ~ 24007310 (+)
G24997 NA non-coding upstream 58127 23860682 ~ 23863793 (+)
G24992 pcsk6 non-coding upstream 70018 23845504 ~ 23851902 (+)
G24898 NA non-coding upstream 496480 23406984 ~ 23425440 (+)
G24897 NA non-coding upstream 515083 23405959 ~ 23406837 (+)
G24856 NA non-coding upstream 636905 23282688 ~ 23285015 (+)
G25013 NA non-coding downstream 1014 23924239 ~ 23926154 (+)
G25056 NA non-coding downstream 107809 24031034 ~ 24031304 (+)
G25069 NA non-coding downstream 121764 24044989 ~ 24046609 (+)
G25084 NA non-coding downstream 162182 24085407 ~ 24087304 (+)
G25103 NA non-coding downstream 227118 24150343 ~ 24153848 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 251841 23657850 ~ 23670079 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 728399 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 782399 23133811 ~ 23139521 (+)
G24606 NA other upstream 1638962 22281700 ~ 22282958 (+)
AMCG00007553 NA other upstream 1655511 22263520 ~ 22266409 (+)
AMCG00007631 NA other downstream 268996 24192221 ~ 24194481 (+)
AMCG00007640 NA other downstream 553262 24476487 ~ 24499650 (+)
G25822 NA other downstream 4160597 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 4515419 28438644 ~ 28454707 (+)
AMCG00007754 NA other downstream 4758946 28682171 ~ 28700062 (+)

Expression


Co-expression Network