G25013


Basic Information

Item Value
gene id G25013
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 23924239 ~ 23926154 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU31374
cacagtattagtatggtgttcctaataatcctttaggtgagtgtatataactaAGCCATTGTGTAATGTGATTGATAAATTGAATACTGTTGGAAGCAGGACATACAGTTGATTTGCATAGGCTTGGGACATTATACACTTAACTGGAGTATGCATTAATCAGGAGAAAGttatgtaatacaaatacaacagtCTATGTGCACACGTACTTGCATATATGACTCGTCTAAATCAGATTCATCACGAGTACAGAGCATAGTGGGCTTCAgctattagtattattagtatttataaaattataaatcagcGACTGATGCCCTTTTGTTTACAGTAGCAGAAGCACAAAAATAGTCAGAAAGCAGTAGGAAAATATTTTACTGCAGGTAAAGCAATAAAGTCTGAACTTTCCTGTAGTGGGCAGCAACTATGCAATTATCATGTATAAAATAATCAggtataaaatacaataaaacagaatatgCAACTTTACTAGTTTCTGTGGGTATCTgcgtttatttatatttttgtattttcactgcATGTCATCTAATCTTCCAAGAATGAGACACCTTAGTCTCATCCCACAGAAACAGTTGGTACAAAAACAATTCCTTTGCCCAGTTTTTGGTGCATTCCAATAACATCCAGCACAGTTGCTAAGGAGAGCTTAATGAGCGTAACTGAAATTAAGTTGTCAAGTACATGACTGTATGAAATGCCTGAGACTTTCTGTCCTCACAGGACAAGCACCTGAGAGCCATGGAGCTCCTATAGGAATGCCCCGGTAAAACTACTGTTTTTGCATGTCATACCTCAAGGGGCCTGACGTTTACCTGGCCACTTCAGGTCACTGCCTACTGCAGCGCTGATGTTGCAGTACATGTTCTGGAGTGCTCGGGACTTTTCTAGTCAAAGGCACCTTACAAAAGAGCAGCTAAAAACTATGAGTGTTCCAGAAGTACCCCTTCACTCAGTCCATAAATGCAACTTTagtcaatatttgtttatataaaatcagCCTTCAGGGCTCTTGTTGTCTTTCAGTAAGGCCAAAGAGGAAGTATTTTATCATGTGCATCACTTTTTGAAAAAGCTTGTGTATATTTTCAGCTGGAGACTGTAAAGTATGTTTTACCTCAGAGCCTTCAgaactgtattaataaaatatgaaatctgcTTGGGCTACCAGAACTAGGGATTCCAGCTGTGTCTGGCTTCAAAACAGAAAGGAAGGTTTAAACAGCATCATCTATGACTGGTGCTGTACGGAAAACTGACCTTTTACTTTTACGTTCCCCTTTAACACAGAAAGTGCTTCTGTTCTTGTTTTGGACCAACTACAGAGAATTGTGAAATGGAGTTGTTTATtgtacaacaaatatatattttagagtCTCCTTTTCATTccattaaagtatatttttaatcttaaaaattAAACGTGTTTCTAGAAGAACCGCTGAGTGTTATGTGGGAATTATAGGTCTTTAAGGAAACATACTAAATGATTCTATCCATGTAAAACCCTATGAGCACATACACATCAGAGTATGATTGCCAACGTGCGTCATTCCATTTCTTGTAGATCTTTTCTTCTCCACCCAGAACTATATTTTTAACCCTTAAAACATAAGCATATATGTCAGTGTCATGCAATAACTTTAGAATattcatgatttatatttacCTGTGTAAATTATACAGTTGTtcttaaagttgttttttatttagaaacTACAGTCTTGAGTTACCAGCTTGTGTGTATTACAATGGATTTAAACCTTAGTTCATAGATTCAGGAGAGCAGAATGGTTCTGTTTAGCAttgaaattagattttaaattcataaaaaaattatttatatatagagagatcaATTCACTTTTattctgtaatatattataatgtaaaaagCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31374 True 1916 lncRNA 0.35 1 23924239 23926154

Neighbor

gene id symbol gene type direction distance location
AMCG00007612 NA coding upstream 4290 23905203 ~ 23919949 (+)
AMCG00007606 lrrk1,LOC106593346,LOC106591281,LOC106562602,LOC106593412 coding upstream 164245 23713183 ~ 23759994 (+)
AMCG00007605 aldh1a3,LOC106562593 coding upstream 215467 23693242 ~ 23708772 (+)
AMCG00007593 NA coding upstream 492518 23422016 ~ 23431721 (+)
AMCG00007598 NA coding upstream 536399 23387661 ~ 23387840 (+)
AMCG00007614 NA coding downstream 16557 23942711 ~ 23960914 (+)
AMCG00007613 clpx,LOC107737000,LOC107594724 coding downstream 43687 23969841 ~ 23977600 (+)
AMCG00007617 NA coding downstream 53260 23979414 ~ 23985768 (+)
AMCG00007616 ubap1l,ubap1lb,LOC106562636,LOC106587705,LOC107685210 coding downstream 61592 23987746 ~ 23994665 (+)
AMCG00007619 NA coding downstream 71283 23997437 ~ 24007310 (+)
G25011 NA non-coding upstream 1014 23921920 ~ 23923225 (+)
G24997 NA non-coding upstream 60446 23860682 ~ 23863793 (+)
G24992 pcsk6 non-coding upstream 72337 23845504 ~ 23851902 (+)
G24898 NA non-coding upstream 498799 23406984 ~ 23425440 (+)
G24897 NA non-coding upstream 517402 23405959 ~ 23406837 (+)
G25056 NA non-coding downstream 104880 24031034 ~ 24031304 (+)
G25069 NA non-coding downstream 118835 24044989 ~ 24046609 (+)
G25084 NA non-coding downstream 159253 24085407 ~ 24087304 (+)
G25103 NA non-coding downstream 224189 24150343 ~ 24153848 (+)
G25134 NA non-coding downstream 285528 24211682 ~ 24213444 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 254160 23657850 ~ 23670079 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 730718 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 784718 23133811 ~ 23139521 (+)
G24606 NA other upstream 1641281 22281700 ~ 22282958 (+)
AMCG00007553 NA other upstream 1657830 22263520 ~ 22266409 (+)
AMCG00007631 NA other downstream 266067 24192221 ~ 24194481 (+)
AMCG00007640 NA other downstream 550333 24476487 ~ 24499650 (+)
G25822 NA other downstream 4157668 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 4512490 28438644 ~ 28454707 (+)
AMCG00007754 NA other downstream 4756017 28682171 ~ 28700062 (+)

Expression


Co-expression Network