G25021



Basic Information


Item Value
gene id G25021
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 23957980 ~ 23958182 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU31385
CCCGTCCACTGTTGCTCTATGGCCCTGATGTGCGCCTCAGTGAATTTCCAGTAATGCGCCAGCTTCTTCCACTCGTTGGGCTTGAGGTATTTGGTTGCGAGTCTCCACATGACGGAGCGGATGTGCTGGGTCTCCAGCCTGTGGTCCTGCTTGAAGGTCAGATGTTTGCCCACCCAGGAGTCGGAGTCGCTGTTCAGATTGTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU31385 True 203 lncRNA 0.56 1 23957980 23958182

Neighbor


gene id symbol gene type direction distance location
AMCG00007609 pcsk6,LOC107662249,LOC107742302 coding downstream 71313 23845592 ~ 23886667 (-)
AMCG00007610 snrpa1 coding downstream 123342 23831169 ~ 23834638 (-)
AMCG00007608 NA coding downstream 130265 23822491 ~ 23827715 (-)
AMCG00007607 chsy1,LOC106587790,LOC106562599 coding downstream 136505 23819042 ~ 23821475 (-)
AMCG00007611 chsy1,LOC107742304,LOC107755644,LOC107662251,LOC107691970,LOC107553812 coding downstream 176895 23772732 ~ 23781085 (-)
AMCG00007615 spg21,LOC107594761,LOC107685233 coding upstream 3785 23961967 ~ 23966643 (-)
AMCG00007628 NA coding upstream 38746 23996928 ~ 23997392 (-)
AMCG00007623 NA coding upstream 46657 24004839 ~ 24011628 (-)
AMCG00007627 LOC106587701 coding upstream 59283 24017465 ~ 24021945 (-)
AMCG00007626 NA coding upstream 64371 24022553 ~ 24030570 (-)
G25019 NA non-coding downstream 2568 23954421 ~ 23955412 (-)
G25014 NA non-coding downstream 31743 23924239 ~ 23926237 (-)
G24955 NA non-coding downstream 244686 23713039 ~ 23713294 (-)
G24953 NA non-coding downstream 247885 23709508 ~ 23710095 (-)
G24943 NA non-coding downstream 287898 23667374 ~ 23670082 (-)
G25024 NA non-coding upstream 294 23958476 ~ 23960843 (-)
G25058 NA non-coding upstream 72853 24031035 ~ 24031304 (-)
G25075 NA non-coding upstream 89478 24047660 ~ 24048480 (-)
G25076 mfap1,LOC102796914 non-coding upstream 91042 24049224 ~ 24049437 (-)
G25077 NA non-coding upstream 91371 24049553 ~ 24049784 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 537677 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 1381526 22561496 ~ 22576454 (-)
AMCG00007565 gatm other downstream 1599534 22340599 ~ 22358446 (-)
AMCG00007500 NA other downstream 3485061 20462504 ~ 20472919 (-)
G24217 NA other downstream 3626169 20331513 ~ 20331811 (-)
G25026 NA other upstream 13489 23971671 ~ 23972665 (-)
AMCG00007637 NA other upstream 304508 24262690 ~ 24281564 (-)
G25422 NA other upstream 1306150 25264332 ~ 25264951 (-)
AMCG00007684 shf,LOC108430988 other upstream 1672610 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 2095582 26053764 ~ 26070848 (-)

Expression



Co-expression Network