G25056


Basic Information

Item Value
gene id G25056
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24031034 ~ 24031304 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU31428
ATTGTCTGcacatttttattctcaaaagcGGTCTAATACAAAGTTCCCAGAGTTTCATTATCAACAAGTCTATGTGGAACAGTTCAGAGGGGTGTGGACAGAGACCAGTAAAGCAAAAGGGTAAGGGGTGGGGATTCAATTTAAGCAACACTGTATGTTATGTGTGAATATTGAGGATACTACAGAATGTTCTCTAAAACTGAcatgatttcaaaaataatatacactcacctaaaggattattaggaacacctgttcaatttctcatNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31428 True 271 lncRNA 0.36 1 24031034 24031304

Neighbor

gene id symbol gene type direction distance location
AMCG00007621 NA coding upstream 14421 24013330 ~ 24016613 (+)
AMCG00007619 NA coding upstream 23724 23997437 ~ 24007310 (+)
AMCG00007616 ubap1l,ubap1lb,LOC106562636,LOC106587705,LOC107685210 coding upstream 36369 23987746 ~ 23994665 (+)
AMCG00007617 NA coding upstream 45266 23979414 ~ 23985768 (+)
AMCG00007613 clpx,LOC107737000,LOC107594724 coding upstream 53434 23969841 ~ 23977600 (+)
AMCG00007620 hddc3,LOC107757611 coding downstream 10602 24041906 ~ 24044401 (+)
AMCG00007618 mfap1 coding downstream 16930 24048234 ~ 24051827 (+)
AMCG00007622 serinc4 coding downstream 24892 24056196 ~ 24077348 (+)
AMCG00007633 LOC106526729,LOC108249217,LOC107091076,LOC102219664 coding downstream 198218 24229522 ~ 24230585 (+)
AMCG00007632 tubgcp4,LOC107695351 coding downstream 224842 24256146 ~ 24261899 (+)
G25013 NA non-coding upstream 104880 23924239 ~ 23926154 (+)
G25011 NA non-coding upstream 107809 23921920 ~ 23923225 (+)
G24997 NA non-coding upstream 167241 23860682 ~ 23863793 (+)
G24992 pcsk6 non-coding upstream 179132 23845504 ~ 23851902 (+)
G24898 NA non-coding upstream 605594 23406984 ~ 23425440 (+)
G25069 NA non-coding downstream 13685 24044989 ~ 24046609 (+)
G25084 NA non-coding downstream 54103 24085407 ~ 24087304 (+)
G25103 NA non-coding downstream 119039 24150343 ~ 24153848 (+)
G25134 NA non-coding downstream 180378 24211682 ~ 24213444 (+)
G25138 NA non-coding downstream 197332 24228636 ~ 24228910 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 360955 23657850 ~ 23670079 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 837513 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 891513 23133811 ~ 23139521 (+)
G24606 NA other upstream 1748076 22281700 ~ 22282958 (+)
AMCG00007553 NA other upstream 1764625 22263520 ~ 22266409 (+)
AMCG00007631 NA other downstream 160917 24192221 ~ 24194481 (+)
AMCG00007640 NA other downstream 445183 24476487 ~ 24499650 (+)
G25822 NA other downstream 4052518 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 4407340 28438644 ~ 28454707 (+)
AMCG00007754 NA other downstream 4650867 28682171 ~ 28700062 (+)

Expression


Co-expression Network