G25058


Basic Information

Item Value
gene id G25058
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24031035 ~ 24031304 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU31433
NNNatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatattatttttgaaatcatgTCAGTTTTAGAGAACATTCTGTAGTATCCTCAATATTCACACATAACATACAGTGTTGCTTAAATTGAATCCCCACCCCTTACCCTTTTGCTTTACTGGTCTCTGTCCACACCCCTCTGAACTGTTCCACATAGACTTGTTGATAATGAAACTCTGGGAACTTTGTATTAGACCgcttttgagaataaaaatgtgCAGACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31433 True 270 lncRNA 0.36 1 24031035 24031304

Neighbor

gene id symbol gene type direction distance location
AMCG00007626 NA coding downstream 465 24022553 ~ 24030570 (-)
AMCG00007627 LOC106587701 coding downstream 9090 24017465 ~ 24021945 (-)
AMCG00007623 NA coding downstream 19407 24004839 ~ 24011628 (-)
AMCG00007628 NA coding downstream 33643 23996928 ~ 23997392 (-)
AMCG00007615 spg21,LOC107594761,LOC107685233 coding downstream 64392 23961967 ~ 23966643 (-)
AMCG00007624 vps33b coding upstream 1249 24032553 ~ 24045372 (-)
AMCG00007625 NA coding upstream 21168 24052472 ~ 24055090 (-)
AMCG00007629 NA coding upstream 46848 24078152 ~ 24100673 (-)
AMCG00007630 crtc3,LOC107701275,LOC107695354,LOC107757665,LOC107596420 coding upstream 83251 24114555 ~ 24148021 (-)
AMCG00007635 iqgap1,LOC106562619,LOC107730269 coding upstream 119040 24150344 ~ 24186890 (-)
G25024 NA non-coding downstream 70192 23958476 ~ 23960843 (-)
G25021 NA non-coding downstream 72853 23957980 ~ 23958182 (-)
G25019 NA non-coding downstream 75623 23954421 ~ 23955412 (-)
G25014 NA non-coding downstream 104798 23924239 ~ 23926237 (-)
G24955 NA non-coding downstream 317741 23713039 ~ 23713294 (-)
G25075 NA non-coding upstream 16356 24047660 ~ 24048480 (-)
G25076 mfap1,LOC102796914 non-coding upstream 17920 24049224 ~ 24049437 (-)
G25077 NA non-coding upstream 18249 24049553 ~ 24049784 (-)
G25078 NA non-coding upstream 18511 24049815 ~ 24050073 (-)
G25079 mfap1 non-coding upstream 18844 24050148 ~ 24050436 (-)
G25026 NA other downstream 58370 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 610732 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 1454581 22561496 ~ 22576454 (-)
AMCG00007565 gatm other downstream 1672589 22340599 ~ 22358446 (-)
AMCG00007500 NA other downstream 3558116 20462504 ~ 20472919 (-)
AMCG00007637 NA other upstream 231386 24262690 ~ 24281564 (-)
G25422 NA other upstream 1233028 25264332 ~ 25264951 (-)
AMCG00007684 shf,LOC108430988 other upstream 1599488 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 2022460 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 3326427 27357731 ~ 27370519 (-)

Expression


Co-expression Network