G25075


Basic Information

Item Value
gene id G25075
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24047660 ~ 24048480 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU31450
CCGtctaaaagtttttatttttaacactcCCACAGTCGGATTTAGATTATGGTGATAATGGAgatttttaaatcatcatcatcataatcttCTCTACATGTAATGTCACAGGGCCGCTGATCCCCGGCCCTCACTTAACTTCAACCCCAGCTATCCCTCGCATACCTTTTTCATTGCGGACCGGCACAGCCCCGGCCGTGGACTGGATCGGCGGCTGCTTCATGTTGAGAGAGTTTGGTGCCGCCATACTGGCTGATGAAAAGACCAAAacctttattaataataataactattttagTAAAGCATAAAAACCCTCGACTTCTCGCCCCGTTCACTCCTCGTACAGACAGGAAGTAGATGAACCAGATACCGGATGTTGTTGCATCCGGACTCTCGGCAACTCGGCGTGAACATATAGGTTCCTGTGTAATTGAATCATGCCATACATGTAGCAGGACCTTCTATGTGTATTAATCATAGGatggatttatatttatttgtctaatGTGGCactaaatataatgtaaagaaCGATTTATCAAcgttatgcatgtattttaacattggTTTGAATAATTCGATATCAAAAGTGTTGGAAATAAagcatgaaataaaacactattgccgcgtttccactggctgagcgtCCGGACGCGCCTGTTCAGAGCCGGTTAACTAACGTCCGTCCACTGAGGACACGAGTCTCTATCAGAGCGGAGGACTGTGTTTGACTGAGACACCGGAGGACAGCAGACACACTGTGTGGGAGGATATAGTCTCAAGTGCcggtgcgatcacgaagaaatggcagttttattagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31450 True 821 lncRNA 0.44 1 24047660 24048480

Neighbor

gene id symbol gene type direction distance location
AMCG00007624 vps33b coding downstream 2288 24032553 ~ 24045372 (-)
AMCG00007626 NA coding downstream 17090 24022553 ~ 24030570 (-)
AMCG00007627 LOC106587701 coding downstream 25715 24017465 ~ 24021945 (-)
AMCG00007623 NA coding downstream 36032 24004839 ~ 24011628 (-)
AMCG00007628 NA coding downstream 50268 23996928 ~ 23997392 (-)
AMCG00007625 NA coding upstream 3992 24052472 ~ 24055090 (-)
AMCG00007629 NA coding upstream 29672 24078152 ~ 24100673 (-)
AMCG00007630 crtc3,LOC107701275,LOC107695354,LOC107757665,LOC107596420 coding upstream 66075 24114555 ~ 24148021 (-)
AMCG00007635 iqgap1,LOC106562619,LOC107730269 coding upstream 101864 24150344 ~ 24186890 (-)
AMCG00007634 NA coding upstream 202986 24251466 ~ 24256041 (-)
G25058 NA non-coding downstream 16356 24031035 ~ 24031304 (-)
G25024 NA non-coding downstream 86817 23958476 ~ 23960843 (-)
G25021 NA non-coding downstream 89478 23957980 ~ 23958182 (-)
G25019 NA non-coding downstream 92248 23954421 ~ 23955412 (-)
G25014 NA non-coding downstream 121423 23924239 ~ 23926237 (-)
G25076 mfap1,LOC102796914 non-coding upstream 744 24049224 ~ 24049437 (-)
G25077 NA non-coding upstream 1073 24049553 ~ 24049784 (-)
G25078 NA non-coding upstream 1335 24049815 ~ 24050073 (-)
G25079 mfap1 non-coding upstream 1668 24050148 ~ 24050436 (-)
G25175 NA non-coding upstream 298619 24347099 ~ 24347419 (-)
G25026 NA other downstream 74995 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 627357 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 1471206 22561496 ~ 22576454 (-)
AMCG00007565 gatm other downstream 1689214 22340599 ~ 22358446 (-)
AMCG00007500 NA other downstream 3574741 20462504 ~ 20472919 (-)
AMCG00007637 NA other upstream 214210 24262690 ~ 24281564 (-)
G25422 NA other upstream 1215852 25264332 ~ 25264951 (-)
AMCG00007684 shf,LOC108430988 other upstream 1582312 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 2005284 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 3309251 27357731 ~ 27370519 (-)

Expression


Co-expression Network