G25367


Basic Information

Item Value
gene id G25367
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 24953125 ~ 24953328 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU31813
atatgtgctctgaggaagataagtcgaaacgcgtaagcattatgatgttcactttttctctaataaataatttttgagacatcggtgaatatggactgtttttagacgggagctgctgtccttccttgaccggataattgttctatataaaatcccagGGATAAGGCACCCGCATTTAAGATTGATTAAAACTATTGcaacgcc

Function

NR:

description
PREDICTED: 14-3-3 protein theta

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31813 True 204 lncRNA 0.38 1 24953125 24953328

Neighbor

gene id symbol gene type direction distance location
AMCG00007658 NA coding upstream 147637 24804508 ~ 24805488 (+)
AMCG00007659 NA coding upstream 154119 24795449 ~ 24799006 (+)
AMCG00007657 unc45a coding upstream 159384 24785292 ~ 24793741 (+)
AMCG00007660 NA coding upstream 170000 24781357 ~ 24783125 (+)
AMCG00007655 NA coding upstream 191836 24742934 ~ 24761289 (+)
AMCG00007665 NA coding downstream 29345 24982673 ~ 24984023 (+)
AMCG00007664 NA coding downstream 31669 24984997 ~ 24988135 (+)
AMCG00007663 parp6,LOC106587213 coding downstream 62348 25015676 ~ 25035688 (+)
AMCG00007670 celf6,LOC104962849,LOC106911022 coding downstream 114733 25068061 ~ 25076698 (+)
AMCG00007669 celf6,LOC103138107 coding downstream 187602 25140930 ~ 25170375 (+)
G25302 NA non-coding upstream 11545 24934479 ~ 24941580 (+)
G25303 NA non-coding upstream 41754 24879365 ~ 24911371 (+)
G25300 NA non-coding upstream 91257 24817342 ~ 24861868 (+)
G25209 NA non-coding upstream 388273 24554268 ~ 24564852 (+)
G25203 LOC105015055 non-coding upstream 462377 24484286 ~ 24490748 (+)
G25405 NA non-coding downstream 362459 25315787 ~ 25321025 (+)
G25445 NA non-coding downstream 498205 25451533 ~ 25451793 (+)
G25531 NA non-coding downstream 1100373 26053701 ~ 26061246 (+)
G25561 NA non-coding downstream 1181033 26134361 ~ 26134577 (+)
G25562 NA non-coding downstream 1183439 26136767 ~ 26142288 (+)
AMCG00007640 NA other upstream 453475 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 758644 24192221 ~ 24194481 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 1283046 23657850 ~ 23670079 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 1759604 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 1813604 23133811 ~ 23139521 (+)
G25822 NA other downstream 3130494 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 3485316 28438644 ~ 28454707 (+)
AMCG00007754 NA other downstream 3728843 28682171 ~ 28700062 (+)
AMCG00007763 tbc1d2b other downstream 3946730 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 4049767 29003095 ~ 29006379 (+)

Expression


Co-expression Network