G25422


Basic Information

Item Value
gene id G25422
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 25264332 ~ 25264951 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU31883
CTTGAACTGGTCATCATAGTTCCAGTCTGCCTGGCCGTTTGCAGACGTGAAGGAGTGGGGTCCGGCCGGGGAATGGCTCTCCTCTTCAGGCTCCTGCTTGACCTTGACAACAGGGGAGGGGTTGCTTGGGGGCCCAACAGGGGGGGTGTAGGGGTCTGATGGGATACTATGGCCTTGTTGGAGGGCTAGGGTCTGCTTTCGAAGGTACTCAAGTCCCCCtccttccccctcctcctcctcgtcgtcgtcctcctcctcttcctcgtcaCTTCTGTCATCATCGCCCTCCATCATCTCCTCTTCCTCCGAGTCCCGGCCCCGGTCCTCTTCGTCTCGTTCCGAATCGATGCTGCTCTGGTCGGATGCCCTCTGCCCGCCAGCCACCATTCCAGGCAGACCCTTGCTCAGGAAGCCTTGAGGCAGCTGGTTTCCAGATGCCCGGGCTGCGGCCAAGATGGCCTGTTGTGCCGCCACCTGCTGGGCGTACATGATGTGGGCCTCGCGCAGGTGACGCTCTTTCCTCTCGCGGTTCTCCATTTCCAGCCGTGCCTGCTGCTGTCTCTGCAGCTGCTCCATTACTGCCTCCAGCTTGACACCTGCGTGGGCATGAGGGTACCCCG

Function

NR:

description
PREDICTED: zinc finger protein GLI1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31883 True 620 TUCP 0.62 1 25264332 25264951

Neighbor

gene id symbol gene type direction distance location
AMCG00007667 pkm,kpyk coding downstream 257502 24989512 ~ 25006830 (-)
AMCG00007668 NA coding downstream 284995 24966872 ~ 24979337 (-)
AMCG00007666 NA coding downstream 318536 24934308 ~ 24945796 (-)
AMCG00007661 NA coding downstream 453865 24805791 ~ 24810467 (-)
AMCG00007662 cib1 coding downstream 461954 24799840 ~ 24802378 (-)
AMCG00007677 NA coding upstream 58137 25323088 ~ 25334806 (-)
AMCG00007678 NA coding upstream 74411 25339362 ~ 25355884 (-)
AMCG00007679 NA coding upstream 94828 25359779 ~ 25362397 (-)
AMCG00007675 chrna5,LOC106587222,LOC108440259,LOC106562132 coding upstream 100086 25365037 ~ 25380395 (-)
AMCG00007676 LOC106587228 coding upstream 125238 25390189 ~ 25454403 (-)
G25421 NA non-coding downstream 7971 25252716 ~ 25256361 (-)
G25415 LOC108275329,LOC103046663,LOC108436939,LOC105912564,LOC107696286,LOC103375935,LOC106584709,LOC104942717,LOC107753195 non-coding downstream 16953 25207774 ~ 25247379 (-)
G25387 NA non-coding downstream 275278 24988845 ~ 24989054 (-)
G25375 NA non-coding downstream 282193 24981934 ~ 24982139 (-)
G25248 NA non-coding downstream 722174 24498365 ~ 24542158 (-)
G25446 NA non-coding upstream 186812 25451763 ~ 25452022 (-)
G25615 NA non-coding upstream 1734355 26999306 ~ 26999546 (-)
G25617 NA non-coding upstream 1764020 27028971 ~ 27029294 (-)
G25620 NA non-coding upstream 1804935 27069886 ~ 27070099 (-)
G25655 NA non-coding upstream 1989278 27254229 ~ 27257033 (-)
AMCG00007637 NA other downstream 982768 24262690 ~ 24281564 (-)
G25026 NA other downstream 1291667 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 1844029 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 2687878 22561496 ~ 22576454 (-)
AMCG00007565 gatm other downstream 2905886 22340599 ~ 22358446 (-)
AMCG00007684 shf,LOC108430988 other upstream 365841 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 788813 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 2092780 27357731 ~ 27370519 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 3629742 28894693 ~ 28921123 (-)
AMCG00007768 NA other upstream 3736098 29001049 ~ 29013947 (-)

Expression


Co-expression Network