G25445


Basic Information

Item Value
gene id G25445
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 25451533 ~ 25451793 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU31915
ctgaaaatgaaaaggaataaaaagagATATGAGCACTACAGTTAACAATGATCCTTATATTAATCTTGGCTGTGTACACCATTAACTTGGAGCATAGCATGGGAAAGACAAAGCAACTGTAGAACACAGCTTAGACTTTGGATCTTTCAATAGTCCACCATTTATGGATGCAAAGAGAGCatttcaataatgtattaaatatgagATAAATTGTTGAATTTGTTTCTCAACTGCGGGCAAGAACAGAGAAGTTCAAGCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31915 True 261 lncRNA 0.35 1 25451533 25451793

Neighbor

gene id symbol gene type direction distance location
AMCG00007674 LOC107097412,LOC102790211 coding upstream 136624 25304279 ~ 25314909 (+)
AMCG00007671 NA coding upstream 195172 25247801 ~ 25256361 (+)
AMCG00007672 LOC103046663,LOC107096723,LOC100697142,LOC101479677,LOC102219286 coding upstream 204184 25241954 ~ 25247349 (+)
AMCG00007673 NA coding upstream 218038 25232890 ~ 25233495 (+)
AMCG00007669 celf6,LOC103138107 coding upstream 281158 25140930 ~ 25170375 (+)
AMCG00007680 LOC107661444,LOC108436947,LOC107696278 coding downstream 2887 25454680 ~ 25467236 (+)
AMCG00007681 NA coding downstream 82716 25534509 ~ 25534985 (+)
AMCG00007682 LOC102220226,LOC108442892 coding downstream 83761 25535554 ~ 25673151 (+)
AMCG00007685 NA coding downstream 246430 25698223 ~ 25708138 (+)
AMCG00007686 loxl1 coding downstream 568021 26019814 ~ 26036364 (+)
G25405 NA non-coding upstream 130508 25315787 ~ 25321025 (+)
G25367 NA non-coding upstream 498205 24953125 ~ 24953328 (+)
G25302 NA non-coding upstream 509953 24934479 ~ 24941580 (+)
G25303 NA non-coding upstream 540162 24879365 ~ 24911371 (+)
G25300 NA non-coding upstream 589665 24817342 ~ 24861868 (+)
G25531 NA non-coding downstream 601908 26053701 ~ 26061246 (+)
G25561 NA non-coding downstream 682568 26134361 ~ 26134577 (+)
G25562 NA non-coding downstream 684974 26136767 ~ 26142288 (+)
G25574 NA non-coding downstream 811034 26262827 ~ 26270720 (+)
G25588 NA non-coding downstream 861570 26313363 ~ 26313565 (+)
AMCG00007640 NA other upstream 951883 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 1257052 24192221 ~ 24194481 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 1781454 23657850 ~ 23670079 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 2258012 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 2312012 23133811 ~ 23139521 (+)
G25822 NA other downstream 2632029 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 2986851 28438644 ~ 28454707 (+)
AMCG00007754 NA other downstream 3230378 28682171 ~ 28700062 (+)
AMCG00007763 tbc1d2b other downstream 3448265 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 3551302 29003095 ~ 29006379 (+)

Expression


Co-expression Network