G25446


Basic Information

Item Value
gene id G25446
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 25451763 ~ 25452022 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU31916
GGGTGTTTGATACACGATTCATACATTATCTCCTTGCTTGGAGCCATGGTAACTCACTTACCATACTTTCGTCCTGTATTCTCTTTAAGGCTCTCCATTTAAAATAACCGACAGCTGAGTGCCCAGCCTATTAGCTGCAGATGCTCTGATGAGAAATCTGCAATTCAATCTGATATGTGTGTTCAACATTGTGAATAAAGCCAAGGTTCCTTTTTTCATCAGCATTTCCCCTGCTTGAACTTCTCTGTTCTTGCCCGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31916 True 260 lncRNA 0.42 1 25451763 25452022

Neighbor

gene id symbol gene type direction distance location
AMCG00007675 chrna5,LOC106587222,LOC108440259,LOC106562132 coding downstream 71368 25365037 ~ 25380395 (-)
AMCG00007679 NA coding downstream 89366 25359779 ~ 25362397 (-)
AMCG00007678 NA coding downstream 95879 25339362 ~ 25355884 (-)
AMCG00007677 NA coding downstream 116957 25323088 ~ 25334806 (-)
AMCG00007667 pkm,kpyk coding downstream 444933 24989512 ~ 25006830 (-)
AMCG00007683 LOC107739093,LOC107712505 coding upstream 201698 25653720 ~ 25658719 (-)
AMCG00007689 NA coding upstream 220583 25672605 ~ 25681857 (-)
AMCG00007688 NA coding upstream 411000 25863022 ~ 25895601 (-)
AMCG00007693 NA coding upstream 684630 26136652 ~ 26161514 (-)
AMCG00007694 hmg20a,LOC102798875 coding upstream 810966 26262988 ~ 26272450 (-)
G25421 NA non-coding downstream 195402 25252716 ~ 25256361 (-)
G25415 LOC108275329,LOC103046663,LOC108436939,LOC105912564,LOC107696286,LOC103375935,LOC106584709,LOC104942717,LOC107753195 non-coding downstream 204384 25207774 ~ 25247379 (-)
G25387 NA non-coding downstream 462709 24988845 ~ 24989054 (-)
G25375 NA non-coding downstream 469624 24981934 ~ 24982139 (-)
G25248 NA non-coding downstream 909605 24498365 ~ 24542158 (-)
G25615 NA non-coding upstream 1547284 26999306 ~ 26999546 (-)
G25617 NA non-coding upstream 1576949 27028971 ~ 27029294 (-)
G25620 NA non-coding upstream 1617864 27069886 ~ 27070099 (-)
G25655 NA non-coding upstream 1802207 27254229 ~ 27257033 (-)
G25697 NA non-coding upstream 1901946 27353968 ~ 27355254 (-)
G25422 NA other downstream 186812 25264332 ~ 25264951 (-)
AMCG00007637 NA other downstream 1170199 24262690 ~ 24281564 (-)
G25026 NA other downstream 1479098 23971671 ~ 23972665 (-)
AMCG00007594 zfand6,zfand5,zfand5a,LOC105015049 other downstream 2031460 23406928 ~ 23420303 (-)
AMCG00007572 LOC107703942,LOC103366351,LOC107665298,LOC107726337 other downstream 2875309 22561496 ~ 22576454 (-)
AMCG00007684 shf,LOC108430988 other upstream 178770 25630792 ~ 25631592 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other upstream 601742 26053764 ~ 26070848 (-)
AMCG00007704 NA other upstream 1905709 27357731 ~ 27370519 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 3442671 28894693 ~ 28921123 (-)
AMCG00007768 NA other upstream 3549027 29001049 ~ 29013947 (-)

Expression


Co-expression Network