G25615


Basic Information

Item Value
gene id G25615
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 26999306 ~ 26999546 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU32121
accacggagcaatggaggaaggtggcctggtctgatgaatcacgagttcaaggtgttgacttggcctccaaattccccagatctcaatccaatcaagcatctgtgggatgtgctggacaaacaagtccgatccatggaggccccacctcgcaacttacaggacttaaaggatctgctgctaacgtcttggtgccagataccacagcacaccttcagaggtccagtggagtccatgcctcga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32121 True 241 lncRNA 0.53 1 26999306 26999546

Neighbor

gene id symbol gene type direction distance location
AMCG00007695 LOC107560004,LOC107562294,LOC107727415,LOC107673268 coding downstream 518428 26479031 ~ 26480878 (-)
AMCG00007694 hmg20a,LOC102798875 coding downstream 726856 26262988 ~ 26272450 (-)
AMCG00007693 NA coding downstream 837792 26136652 ~ 26161514 (-)
AMCG00007688 NA coding downstream 1103705 25863022 ~ 25895601 (-)
AMCG00007689 NA coding downstream 1317449 25672605 ~ 25681857 (-)
AMCG00007699 snx33 coding upstream 200097 27199643 ~ 27212764 (-)
AMCG00007706 crabp1,crabp1a,LOC105895658 coding upstream 293881 27293427 ~ 27307131 (-)
AMCG00007705 s2544,LOC108438536 coding upstream 325155 27324701 ~ 27334387 (-)
AMCG00007713 NA coding upstream 518992 27518538 ~ 27532721 (-)
AMCG00007712 NA coding upstream 566621 27566167 ~ 27569541 (-)
G25446 NA non-coding downstream 1547284 25451763 ~ 25452022 (-)
G25421 NA non-coding downstream 1742945 25252716 ~ 25256361 (-)
G25415 LOC108275329,LOC103046663,LOC108436939,LOC105912564,LOC107696286,LOC103375935,LOC106584709,LOC104942717,LOC107753195 non-coding downstream 1751927 25207774 ~ 25247379 (-)
G25387 NA non-coding downstream 2010252 24988845 ~ 24989054 (-)
G25375 NA non-coding downstream 2017167 24981934 ~ 24982139 (-)
G25617 NA non-coding upstream 29425 27028971 ~ 27029294 (-)
G25620 NA non-coding upstream 70340 27069886 ~ 27070099 (-)
G25655 NA non-coding upstream 254683 27254229 ~ 27257033 (-)
G25697 NA non-coding upstream 354422 27353968 ~ 27355254 (-)
G25726 NA non-coding upstream 430211 27429757 ~ 27540936 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other downstream 928458 26053764 ~ 26070848 (-)
AMCG00007684 shf,LOC108430988 other downstream 1367714 25630792 ~ 25631592 (-)
G25422 NA other downstream 1734355 25264332 ~ 25264951 (-)
AMCG00007637 NA other downstream 2717742 24262690 ~ 24281564 (-)
G25026 NA other downstream 3026641 23971671 ~ 23972665 (-)
AMCG00007704 NA other upstream 358185 27357731 ~ 27370519 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other upstream 1895147 28894693 ~ 28921123 (-)
AMCG00007768 NA other upstream 2001503 29001049 ~ 29013947 (-)
AMCG00007817 NA other upstream 4192464 31192010 ~ 31246649 (-)
AMCG00007822 NA other upstream 4339170 31338716 ~ 31342792 (-)

Expression


Co-expression Network