G25699


Basic Information

Item Value
gene id G25699
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 27355874 ~ 27356077 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU32219
ATCGGATGAgaaatgctatattccaatggCAGGTTtagaaattataaaaattatGTAAGAACAAGTAAGTAGGCACCATGCGGCTCTCAAGCTTTTGAGCTTTATCTTTCAGGAACATGCAGCACACTGGACTGTTTACCAAGCCAACTACATGTGGAAGAGTTCTGTCCGTTGATATCATTGGCAAGTCTAGGCAGGAATGGT

Function

GO:

id name namespace
GO:0005540 hyaluronic acid binding molecular_function
GO:0031406 carboxylic acid binding molecular_function
GO:0043177 organic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32219 True 204 lncRNA 0.41 1 27355874 27356077

Neighbor

gene id symbol gene type direction distance location
AMCG00007703 psma4,LOC107738663,LOC107680153 coding upstream 399 27351223 ~ 27355475 (+)
AMCG00007702 NA coding upstream 7523 27334925 ~ 27348351 (+)
AMCG00007701 wdr61 coding upstream 31056 27317539 ~ 27324818 (+)
AMCG00007700 sin3a coding upstream 75329 27262505 ~ 27280545 (+)
AMCG00007697 ptpn9,ptpn9a,LOC106573036 coding upstream 101986 27235994 ~ 27253888 (+)
AMCG00007707 rbpms2,LOC107086560,LOC103368877 coding downstream 73825 27429902 ~ 27448438 (+)
AMCG00007708 ap3b2 coding downstream 121934 27478011 ~ 27504969 (+)
AMCG00007709 cpeb1,LOC106587658,LOC105013741 coding downstream 149589 27505666 ~ 27516702 (+)
AMCG00007711 NA coding downstream 177392 27533469 ~ 27549963 (+)
AMCG00007710 NA coding downstream 197511 27553588 ~ 27566646 (+)
G25677 slc25a44,s2544,LOC108438536,LOC108432728,LOC107673271 non-coding upstream 25672 27328947 ~ 27330202 (+)
G25674 NA non-coding upstream 48808 27303848 ~ 27307066 (+)
G25658 NA non-coding upstream 73764 27280657 ~ 27282110 (+)
G25645 NA non-coding upstream 98876 27254101 ~ 27256998 (+)
G25631 NA non-coding upstream 164495 27191169 ~ 27191379 (+)
G25709 ppib,LOC102792920,LOC107680152,LOC107577199,LOC107754356,LOC107673286 non-coding downstream 210618 27566695 ~ 27569353 (+)
G25753 NA non-coding downstream 214466 27570543 ~ 27571491 (+)
G25819 NA non-coding downstream 714269 28070346 ~ 28078121 (+)
G25827 NA non-coding downstream 748525 28104602 ~ 28109590 (+)
G25984 NA non-coding downstream 1375053 28731130 ~ 28731401 (+)
AMCG00007640 NA other upstream 2856224 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 3161393 24192221 ~ 24194481 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 3685795 23657850 ~ 23670079 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 4162353 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 4216353 23133811 ~ 23139521 (+)
G25822 NA other downstream 727745 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 1082567 28438644 ~ 28454707 (+)
AMCG00007754 NA other downstream 1326094 28682171 ~ 28700062 (+)
AMCG00007763 tbc1d2b other downstream 1543981 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 1647018 29003095 ~ 29006379 (+)

Expression


Co-expression Network