Gene
RNA
| Item | Value |
|---|---|
| gene id | G25748 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 27562728 ~ 27563018 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04672 | Intestinal immune network for IgA production |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU32284 | True | 291 | lncRNA | 0.55 | 1 | 27562728 | 27563018 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00007713 | NA | coding | downstream | 30007 | 27518538 ~ 27532721 (-) |
| AMCG00007705 | s2544,LOC108438536 | coding | downstream | 228341 | 27324701 ~ 27334387 (-) |
| AMCG00007706 | crabp1,crabp1a,LOC105895658 | coding | downstream | 255597 | 27293427 ~ 27307131 (-) |
| AMCG00007699 | snx33 | coding | downstream | 349964 | 27199643 ~ 27212764 (-) |
| AMCG00007695 | LOC107560004,LOC107562294,LOC107727415,LOC107673268 | coding | downstream | 1081850 | 26479031 ~ 26480878 (-) |
| AMCG00007712 | NA | coding | upstream | 3149 | 27566167 ~ 27569541 (-) |
| AMCG00007719 | NA | coding | upstream | 104503 | 27667521 ~ 27672745 (-) |
| AMCG00007722 | LOC106562765 | coding | upstream | 310245 | 27873263 ~ 27879135 (-) |
| AMCG00007724 | NA | coding | upstream | 316242 | 27879260 ~ 27884397 (-) |
| AMCG00007726 | LOC102788062,LOC101156874,LOC100699863,LOC102296031 | coding | upstream | 494417 | 28057435 ~ 28063864 (-) |
| G25746 | NA | non-coding | downstream | 8618 | 27553497 ~ 27554110 (-) |
| G25726 | NA | non-coding | downstream | 21792 | 27429757 ~ 27540936 (-) |
| G25735 | NA | non-coding | downstream | 57766 | 27500950 ~ 27504962 (-) |
| G25730 | NA | non-coding | downstream | 111217 | 27438008 ~ 27451511 (-) |
| G25697 | NA | non-coding | downstream | 207474 | 27353968 ~ 27355254 (-) |
| G25749 | NA | non-coding | upstream | 222 | 27563240 ~ 27563690 (-) |
| G25750 | NA | non-coding | upstream | 1021 | 27564039 ~ 27564709 (-) |
| G25768 | NA | non-coding | upstream | 99206 | 27662224 ~ 27667072 (-) |
| G25968 | NA | non-coding | upstream | 1113822 | 28676840 ~ 28702537 (-) |
| G25972 | NA | non-coding | upstream | 1133447 | 28696465 ~ 28699849 (-) |
| AMCG00007704 | NA | other | downstream | 192209 | 27357731 ~ 27370519 (-) |
| AMCG00007687 | LOC107703195,LOC107589318,LOC103130145 | other | downstream | 1491880 | 26053764 ~ 26070848 (-) |
| AMCG00007684 | shf,LOC108430988 | other | downstream | 1931136 | 25630792 ~ 25631592 (-) |
| G25422 | NA | other | downstream | 2297777 | 25264332 ~ 25264951 (-) |
| AMCG00007637 | NA | other | downstream | 3281164 | 24262690 ~ 24281564 (-) |
| AMCG00007757 | tbc1d2b,LOC107757764,LOC107659498 | other | upstream | 1331675 | 28894693 ~ 28921123 (-) |
| AMCG00007768 | NA | other | upstream | 1438031 | 29001049 ~ 29013947 (-) |
| AMCG00007817 | NA | other | upstream | 3628992 | 31192010 ~ 31246649 (-) |
| AMCG00007822 | NA | other | upstream | 3775698 | 31338716 ~ 31342792 (-) |
| AMCG00007835 | LOC107594750 | other | upstream | 4241881 | 31804899 ~ 31816151 (-) |
