G25753



Basic Information


Item Value
gene id G25753
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 27570543 ~ 27571491 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU32289
GAATGATGTGGGCAATGACGAGTCACCAGCTCCCAACGAGTTGCTCGCTCAGATGGTTTTGTCAGCCCAGATGACCTCTCGGATTAATCGTCGGACAGAGCAGACCAGAGATGAACTACAGAAAATTAAGAGTAGAGTGGACCGGACAATGCAAGCGTTTGAGCAGGAGAACGGTCGGCAGGCTGTGGGGAGCCTCCAGCAGGCCAGCATGGAGTTTGTGGAAGATATGGCCCATTTAGAAGCACTTGTGGGCAATCCggtgaaaaaaatgaaataccag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU32289 True 280 lncRNA 0.51 3 27570543 27571491

Neighbor


gene id symbol gene type direction distance location
AMCG00007710 NA coding upstream 3897 27553588 ~ 27566646 (+)
AMCG00007711 NA coding upstream 20580 27533469 ~ 27549963 (+)
AMCG00007709 cpeb1,LOC106587658,LOC105013741 coding upstream 53841 27505666 ~ 27516702 (+)
AMCG00007708 ap3b2 coding upstream 65574 27478011 ~ 27504969 (+)
AMCG00007707 rbpms2,LOC107086560,LOC103368877 coding upstream 122105 27429902 ~ 27448438 (+)
AMCG00007717 kiaa0101,paf,LOC106573334 coding downstream 17179 27588670 ~ 27592548 (+)
AMCG00007715 csnk1g1,LOC106573333 coding downstream 41181 27612672 ~ 27619156 (+)
AMCG00007716 csnk1g1,LOC107738908,LOC107594477,LOC107686826,LOC108271196,LOC103370372,LOC107559435 coding downstream 65726 27637217 ~ 27656565 (+)
AMCG00007714 rps17,rs17,LOC107389132,LOC106527967 coding downstream 91501 27662992 ~ 27667229 (+)
AMCG00007718 NA coding downstream 102271 27673762 ~ 27679214 (+)
G25709 ppib,LOC102792920,LOC107680152,LOC107577199,LOC107754356,LOC107673286 non-coding upstream 1190 27566695 ~ 27569353 (+)
G25699 NA non-coding upstream 214466 27355874 ~ 27356077 (+)
G25677 slc25a44,s2544,LOC108438536,LOC108432728,LOC107673271 non-coding upstream 240341 27328947 ~ 27330202 (+)
G25674 NA non-coding upstream 263477 27303848 ~ 27307066 (+)
G25658 NA non-coding upstream 288433 27280657 ~ 27282110 (+)
G25819 NA non-coding downstream 498855 28070346 ~ 28078121 (+)
G25827 NA non-coding downstream 533111 28104602 ~ 28109590 (+)
G25984 NA non-coding downstream 1159639 28731130 ~ 28731401 (+)
G26103 frmd5,LOC107691145,LOC107556247,LOC103373640,LOC570903 non-coding downstream 1502965 29074456 ~ 29082381 (+)
G26146 NA non-coding downstream 1740132 29311623 ~ 29311944 (+)
AMCG00007640 NA other upstream 3070893 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 3376062 24192221 ~ 24194481 (+)
AMCG00007604 asb7,LOC107755647,LOC107662256,LOC107742335,LOC106562481,LOC102792420 other upstream 3900464 23657850 ~ 23670079 (+)
G24824 mesdc1,LOC107553753,LOC107691577,LOC107709503,LOC107662264 other upstream 4377022 23189460 ~ 23193521 (+)
AMCG00007585 star5,stard5,LOC104953929 other upstream 4431022 23133811 ~ 23139521 (+)
G25822 NA other downstream 512331 28083822 ~ 28094741 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other downstream 867153 28438644 ~ 28454707 (+)
AMCG00007754 NA other downstream 1110680 28682171 ~ 28700062 (+)
AMCG00007763 tbc1d2b other downstream 1328567 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 1431604 29003095 ~ 29006379 (+)

Expression



Co-expression Network