G25984


Basic Information

Item Value
gene id G25984
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 28731130 ~ 28731401 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU32611
AttctcttcattcttgggtcaattttcctTTTATGGCCATgtccagggatgttggctaaagtcccatgggccttaaacttcttaataatatttgcaacagtactcacaggaacatcaagctcttcagagatggtcttgtaggaccatgcttggctattaccttctttctaacctcctcagacaactctctggatttccttctcttttccttgttcagtgtgatacacacagtgacacaaaacagcagagtgagtacttttctccatttaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32611 True 272 lncRNA 0.41 1 28731130 28731401

Neighbor

gene id symbol gene type direction distance location
AMCG00007751 NA coding upstream 1412 28723123 ~ 28729718 (+)
AMCG00007753 NA coding upstream 13795 28701981 ~ 28717335 (+)
AMCG00007745 aph1a,LOC103368490 coding upstream 85037 28637896 ~ 28646093 (+)
AMCG00007747 NA coding upstream 107140 28619421 ~ 28623990 (+)
AMCG00007746 commd4,LOC105008267 coding upstream 113732 28612614 ~ 28617398 (+)
AMCG00007752 NA coding downstream 35314 28766715 ~ 28776364 (+)
AMCG00007756 NA coding downstream 201564 28932965 ~ 28936834 (+)
AMCG00007755 NA coding downstream 249422 28980823 ~ 28988913 (+)
AMCG00007767 idh3a,LOC107757767,LOC107659502,LOC103353692,LOC102780018 coding downstream 258312 28989713 ~ 29000085 (+)
AMCG00007765 NA coding downstream 293384 29024785 ~ 29032207 (+)
G25827 NA non-coding upstream 621540 28104602 ~ 28109590 (+)
G25819 NA non-coding upstream 653009 28070346 ~ 28078121 (+)
G25753 NA non-coding upstream 1159639 27570543 ~ 27571491 (+)
G25709 ppib,LOC102792920,LOC107680152,LOC107577199,LOC107754356,LOC107673286 non-coding upstream 1161777 27566695 ~ 27569353 (+)
G25699 NA non-coding upstream 1375053 27355874 ~ 27356077 (+)
G26103 frmd5,LOC107691145,LOC107556247,LOC103373640,LOC570903 non-coding downstream 343055 29074456 ~ 29082381 (+)
G26146 NA non-coding downstream 580222 29311623 ~ 29311944 (+)
G26167 NA non-coding downstream 635972 29367373 ~ 29367723 (+)
G26171 NA non-coding downstream 642975 29374376 ~ 29375878 (+)
G26196 LOC107575789 non-coding downstream 808282 29539683 ~ 29540062 (+)
AMCG00007754 NA other upstream 31068 28682171 ~ 28700062 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other upstream 276423 28438644 ~ 28454707 (+)
G25822 NA other upstream 636389 28083822 ~ 28094741 (+)
AMCG00007640 NA other upstream 4231480 24476487 ~ 24499650 (+)
AMCG00007631 NA other upstream 4536649 24192221 ~ 24194481 (+)
AMCG00007763 tbc1d2b other downstream 168657 28900058 ~ 28911566 (+)
AMCG00007769 acsbg1 other downstream 271694 29003095 ~ 29006379 (+)
AMCG00007788 NA other downstream 890910 29622311 ~ 29724734 (+)
G26258 tpm1,tpma,LOC108237348 other downstream 1023639 29755040 ~ 29819552 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 2682753 31414154 ~ 31440378 (+)

Expression


Co-expression Network