G26103 (frmd5,LOC107691145,LOC107556247,LOC103373640,LOC570903)


Basic Information

Item Value
gene id G26103
gene name frmd5,LOC107691145,LOC107556247,LOC103373640,LOC570903
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29074456 ~ 29082381 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU32753
tttcgtttaaacattttcaatgtttatttcaagttttaatattttcatggCACCAGTTACAAGGGACTATCAGAAAGAAACAATATCTTATACTGTTTCATATGGAAGATTACCTACAGTACAAAGATGGTATCGGAATGAGTAAGACTGAACAGAAAACTGGATTTTGGCACACAAATGTGGCatgtctttcatttctttttcatttcttctccCCACTTCCAAATCACATAACAGCAATCTCCATTTGGGAATTAAAAGTTGCAGTCTCTCATGATTAAGAcatagaaatacagaaaacacactCATAGAAACCTGTATCcaaaagcacagctccaaatgTATAAACCTGGTCACCAGTGAGTGTGTTGGGGATGCTGATAGAAAGGTATGTAAGTAAGACGTACTTGAGCTCAGCTTTTTTGATGTACTGTCACTGACTTTTCCTTGGCATTAGTTTAGGTGGAGGGAAGGGGGGATATCAGGAAACAGGCAAATGTTTTGCTTCAACTGACCACAAACAACAAATGATACATAAAAACACTTctaaatgtatcatttatttataaatacataaataataaataggcAATTCGATCAAATTTAAACACCGTACAATGCACTACTGGTTTGATCTTGGACACCATTTAGATTCTGTTTGGAAATCCCCACATTTATTATTGCCACCAGGCCGTCGGTCTCCTTCGGTGATTCATCGTATTTATCATCAACAGTCCTTTGCTGCACCTGTCACTTTGCACAGCAAAGGTCATGTCATGTCAGGGTCGACTCTGTACTTTAACCAGACGTTGCATCCTGATGGCACTCTCGACACCCAAGGATAGGGAGTCACCTCATTTCCCAGAATGCCTAGGGGAAAGCTAATGGTCTGCTTTGCAACAGGCCTCCTACATCTTGCCAAGTTTACAAACCCATTGCCAGATTACTCTCCCCCAGCCTACTTTGCGCTGGGCATATGTCCACAGCTCATTTGGCAGCAGTTCACTAACCTGCTTCTCAACAGTCTGCACAGAcggaagtaaaaaataataataatacaacaaagtGCAAATCATAACACCACACCATGTGAAATCAGAGTAGTATGCTTTTTAAAGATTACTTCATTTAGAGAGCCTTTTTAAGGCCAAATTACTATTGAACATGTAAGACTGTTCTACACAGTAATGTTGTCGTAAGGTCTCAGGTAAAGCTGTATTATAATTCGCAAGCGAAATAAGATTAATAATTCCAgacttttatatataatctacGTCACCTGCTTTTTTGTGATCACGTGACATATCTGCATGTGTTATTGTCCGTCTATGTTGCACACCTAAGAAAACATGCAACAAGATCTTTAGGTGGAAAGGGGGAATTGCATTgctttgcaaaataattaatggaagaCTCTTTTAAAGATCTGGGTTCTGTATTCACCTATGCAGAGCACATTCCCTACTCCCTTCCTCTGACTGACACATGCCAAAGTCTTGCCCATGTGACCGTGAGGGATGAGTGACTATGAGCCAGGGTCTGGACGAGCAGTTCATAGCTGAGCAGCTGTGTACAATCCTGCTTGAACGTACAGCATACAGATCCTTCAAGGGCAGCAAGATTAAAATAGAACAAATGGGAGGAAAAGTGCCTTTGACAAGCAGGTTAGATTTGCTTCAAATGTCTTCATGTGCCTGGTAACATGGTCACCTTTCTAGAAAGCAGGCTAGGAGAAAAAACTAACTGTGCAGGGAGAGTTTAAAGGTTTAAGCCTTAGAAATCTGTCAGTCACTGAGTATTTTAGTTAAGATTATGTGACATAAACcagaaaattgtttttttttttctggtttgctCAAGGAGCAAACATGTTTAATGGCCCTTCATCAGCTACCTAAACCCCCTCTTCAGAACTGGATTTCCCCAAAGATCTGGTCTGTCAAAAATGGTTGTGCATCAATGTTTGAAGGCTAATTGGTCACTCAATGCCTAAATCCGATTCAACTgggtgattattttttaaagctgtttcaATAATATTCCTTGGAGCTCATGaaatctgtttctctctctcaaagaaaaagaaaagtgtacaaTGAATTGTCTGGTATTAAAAGCTATCCCAGGCTAGAGGGATAGctttgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaaggcattcaagacggaaaacaggagacacttcttcacacagacagtAGTCACAatcgatgtggttgaagctgaaaatttgggaacatttaaaaatagactggataggatccttggatcacttagttattaatggacaccaaatgagcataatgggtcgaatggcctcctctcgtttgtaaactttcttatgttcttatgttctggGAGTAAAAGAGTGCTAAAATGGTAGTTgaagaaaaaaggcaattaCAAATTCTCTATTAAAAACTATccatttgtaatacattttatctaTTGAAAATGTGAGTACACTCATCATTAGTAGTAAACTCTTAAGGGGTCTGAAATGCACTTTAGTTCAACAGAATGATTGTCTAATAAGTTGCGAGCACATGGTTATATcatgacaaataaatagaacTAATCTGATCCTTCACTTGCTTTCTCTTCTACCACAAGTGAGACTTTGGTAATTCTCATACTAATCTGCTATGAACAGGGAGACAGACTCACACAGGGGGGCACACAAGACCAGAGACAGAAGACCTAGTTAAAATATGACCAGATATCCAGAAAAGATTAGAATTCAGTTCTACACAGATGCCTCAGAAAAGAAAGTGAGCTGACGATTGGCTGATGTGCTTTAACTTTGAAAGGATATCACATTTGCATGTCAAATTGTGATGttataccttaaaaaaaaaaaaggaaggcaATACTCCACTGCatcttttctgtttcagttcttACATGACCTTGTAATAAGCATTAAAACAGTTTGCTGGGTAATACTTAATTACCACACAGAATGACAACTTAAAAATAACCAACcaatcaaccaaccaaccaaaaccaaaaaaaacaaaaaaacaataacaaacaaacacatctgtaGGACCACAACATTTACATCTGGAATTCCTACAACAGCACAAAATTTGATTTGCATATACTttctggtaaaaaaataaaaaataaatcaaaggtcAACCAGAAACCAGTCAGAAACCATTTCCAACAGAAACTGATTTGAAAattaatatagtaataataaacaaagggGTGAACAAGATATCCTGATGTAATTTCCCTTTAGTAAAATCCACTCAACAAAATTTCAGTTtaacctaaagaattattattaagtattgttaaaaaaaaaaaaaggccagacTGTTTTGACATCCCTGACTTAATCTTTCACAGGAGCTGAATACATCCAATATTTTTTACAGCTTGTGGCTACCAGAggtgaatttttatttttgtgtggtcTTTTTGTATCACAATTTTATTGCTTATTGCTCACTGAATGGCATTGCCTTATTTGAGTTATTCCACATTTGGCTCACCAGGAAATACAATCTTCACACTGACGCTACATTACGCtgtaaaaaatagtaaaaatggAGACCAACACTTTCTTGTTCCATCAacttccttttttccttttcacaaaacaaacaggcccTCTGTAATACATCATTACCTGGTACACAGTTACCTggctttccttgtttttgttttgaacattgtACCCTGTTCACAAAAGCCCTGTTTCTGGCGTTCTTCTTACATTCTtcacatagattttttttgtgatAGCATCTCACACATGTCTCACACAGGAAGCAATCTGCAAGAGGTACACAATGTTGTAGCACAACCAGCAAaccaacaaccaaaaacaaacaacaacaaaaaagcattaaaacaaaacagcactgcCACATGTTAATTGTAAACGCTACTCGAGAGCCCACTAGGTTTTTCAcggaaaaaaaagctttgaaaaacagCTTGCTTTCAGTCGCTCATGTTCTCTTCACAATAGCGTTTCATGGAAAACTCTTGAGATTGCTCAGGAGCATTCTTCCATCTTTAAACAAtctggatgtgtttttttttttcctagggTGTGCTTACTGTCCATAACTCCTACAACACGGCCATGCTCTTAAAAGTTTAGACGGGGGAGAGTCTATTCTGGGGATGAGGTTTATAACAgcaatgcacaaataaacagcACAGGTCTTAATGCTGTGTACCAGGCAACAGCAGTGGCTTTCGACAGAGCACTGCATTTAAACAGTGTTAAACTGTGTCCACCCTGAGCAGCTCTGATGTTCTGGTCACGTCTCTCCAAACTCAGCACATGAGGTTTTGAGCACTGGCAGCACAGCAGGAGATTTGAGCAGAACCATGCTGCCGCAGCAACTTGAATACAGAGCCCGAATCAGGGCTGGGCTGAAATGGATTTTGGCCTGGAATTATGAACAACAAGCACACTCCTACCACCAGTCCAACCaactgccattttttttttctgcattcgCCAGCCTCCTTGGATATGTCCTTCCTATCTCCACATCCCTCGTGCCAGTTTCTCTTTCTACACACACTTCCCTTCCACCTCCCCAGCTcgcttttttaaaataaagcaagtCTCAAAATACCCATTTTGAATTCTTAGAAATGTACATTAGACAGctagatttaattttatacacacacattttgaggggaaccaaaaacaaatgcacaaaaagtAAAACGGGGTTTACCCAGAGTTCCAGTCCAGTGTCTCCAGAGTTCCATTTCCAaggtcaaaatgtaattattattgctcCCTCAGTCTCTACAAATAAGGGCCATCTATATATTCACGGAGGGCAACGTTAATATACCACACATGGGTAGCACCGTAACCTTATTTCACTGGGACTCTATATGTACACCTGCCTTCCTCTTACTAATAAGTGAAAGCCTTTTACAGCCACTGAACTGTGTCCTTGTGATCTGGTTGTAGAAATAtacatgcaaaaaatatatagggatatatatatatatataaatatatattcctgaCATTTCTGAGGAAAACACGCTAAATAAAGCCTTCTAAATGTCAACACAAATCTTCCATTGTCAGTCTTTAATAGGGTGgagaaaaatgtaacatttacacAGTTCAGAAGCATTTTGCGGCTGTAAATTCACACAGGTGTTTTAATCTGTTGTGACTGAACCAGATACTGCAGCAGCGGCAGCCTACTGCTCTGACACCATCTAAATCACAAACCTATCAGATACTCTCTTCTGCTTAAGTGCAGGAATATGGAACAATACAGGATGCCTCGCAGAGATTGTGGTGAGAAAAATGTGTCCGTGAGTTGGACTGGATAAAGCACTGTTCTAGACAATCCCCTCCTCAACTCCCCCACATGCAGTCGCATCTGATCCACTGAgctaaaaaatgtataatttaatttctgaataacaaaataacatttcagttttgttaaaatatacaaGGAAAAAACAGTCAATATATATTAGGAAAGAAATTACTTTGTACAAAAAGTACagcaattattattattattattattattattattattattattattattattattattttcacaattaaaaacttAATAGCATAGTCAATTTGGATTTGAAAACCcagatttaaattgaaaaaccACCACTTTTCATGTCTCTTCTTAATATTGTACTTGGAAATCAATTGGGAAGagttatcaaaaacaaaacaaggaaaaatgCTGATGCACTAACAAATGCACACGAACAAAAggtttgaaacttttttttgcACTAAAACCATAGCTTTATTATATTGCACATCTAGCTAAACTGGATCTACAGGTGTTAGTAAATGTCTTCGGGGGGTAGACCATTAACACTTTTCTACCAGGTACTGACACTGCTAGGTCACATAACAGTACACCATTTTAACTATTTAAgttattaaactttaatttaattgtattctttttaatatattatttaaaaaaatctgaattctaCTACACAGCTTGCTACTGCTTACACATAATTGAATTCCTATGAAAGTATATTTGAAGCTCTTTGAAATAAGACAGCAAAATTCAAGAACCGCTATTTGCTCATTCTGCCCCCGCTCTCTGTCAACCTTCCCGCCACAACACAAAGTGTGCACAGATTAGTAaagttgcttttgttttttaaaaaaatatggcaTCTCtaaaagaatacatttgaagcCTTATTGACAATGCTTTAAATCTCTGTGACGTCCCTTGCAATATGTATAACTCTCCACTTCTGCTTACGATAATTACCCTCAGGTCCCAATTTTCAGATGTTCTTACCAAACTTGGACCTAATTGTCAGCCTCAGGCGTTCACTTCTCACTTCAATTCCATTTGCAAGTTAAAGAAAATCAGCAGAATTGCCAAGATGAAAATGGGAATTCTGTCAGCTcagctttgtttgctttttaccCATCTATAAAACTTCaatctcatttgttttttaataccaTTGTTACAACATAATGGAATACCTATGATAAACATCTCTCCAAACTGTATGtttcacaatttttttaaagcaaataacaACTGAcatcaaaatgaataaatagaaGATAAAgaaggcattttttttaatctccgtTCATAACGTTTCACTTCGTTTTCCCCTCCAAAAGGAACTGTGCGcactgttttcatttgatttgtctgttgtttttttgtcgtttttcatttagattttttgtaaaaataaaattcctgCAATGACCTGATATTTTGGAGAAAAGAAagtaataatagaaaaaaatatatataatcagtttatcccttttttctttaaaaagaaatgtgaaaagaggaacgcaaaaaaaaaaaaaaaaaaagtcttcagaATCTGTCCAGGAGACTTCCATGACGCGGTGTCTGCAGTTTTCATGAGGGAAGCTGGGTTCATGGTCAGATGGTTGCCGCACTCCATCATTGTGATGTTGGAAACTGCAGCAGTAGTTGTGTTATCATCTTCTCTGATCCCCCatgggggaggagagaggggggggcagCCGGTATTACAGCCCATTTTTCCCTTGTTTTTCACGTGTCAATGAGCAGGCCCACCAGCCAGCGGAACTTGCAGGCAAACCATCGCCTGAGGGGACAAAAGTATTCGTAATGGAACTGCTCAAACTCAGGGGTTTGCCGAATATCACGTAAAAATGCAATGTCAAGGTCAGACTCGGTAAGAAcgatgaggaggaggagcaaGACAAAGAGGAGTCCAATGGTCACAAGGAGCAAACGGAGGACACTTAAAACAAACTTATTCACCTGTTCCACTTCGCCCAGTGAGGACGCCCCCCCGGCCTCCCTGGAGTGGTCAGGGTTCAGGACTTTACCATCGGGACCGAACTCAATCATGTCTCCGGATATGGGGGTCCCTGCCTCTGACTCTTTCTCCTCTTCAATGCTGCATGGGGCACCGTTGATCTGCCTCGCGACGGCCAGCTCCAGGCTGTGCTCGGCAACGGGGGTGGGCAGCACGCTATGTGAGGGGCTGTAAATCTCGTCCGAGATCACGGCGCTGCCCCCCTCGCAGCTGTCCGTCACCAGGCTGCGGGAACGTGGCACGAACGAGTCGCCATGGGAGGCCGAACGCACTGGGGTGGAGTGGGCGCTGTCACGCAGGGACTCCAGACCTGCCGGTGGCGTGGGGTGCGAGGAAGGGAGGGTGCGGAGGGACAGGGAGGAgcggagagagaaaaagaaaaacttagTCACTTGCAAAAAGCACAACTCCTTCTCGTCTCATACAGACACTGGATGGTAAATCAGAA

Function

symbol description
frmd5 Predicted to be located in cytoskeleton and membrane. Predicted to be integral component of membrane. Orthologous to human FRMD5 (FERM domain containing 5).

NR:

description
PREDICTED: FERM domain-containing protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32753 True 7879 lncRNA 0.39 3 29074456 29082381

Neighbor

gene id symbol gene type direction distance location
AMCG00007766 NA coding upstream 3000 29059031 ~ 29071456 (+)
AMCG00007764 blm coding upstream 19005 29032754 ~ 29055451 (+)
AMCG00007765 NA coding upstream 42249 29024785 ~ 29032207 (+)
AMCG00007767 idh3a,LOC107757767,LOC107659502,LOC103353692,LOC102780018 coding upstream 74371 28989713 ~ 29000085 (+)
AMCG00007755 NA coding upstream 85543 28980823 ~ 28988913 (+)
AMCG00007774 NA coding downstream 176049 29258430 ~ 29288693 (+)
AMCG00007775 NA coding downstream 238850 29321231 ~ 29336890 (+)
AMCG00007773 sec11a,LOC107691153 coding downstream 257265 29339646 ~ 29342580 (+)
AMCG00007776 NA coding downstream 268689 29351070 ~ 29351882 (+)
AMCG00007777 kti12,LOC107562123,LOC107715238,LOC107725737 coding downstream 272670 29355051 ~ 29361487 (+)
G25984 NA non-coding upstream 343055 28731130 ~ 28731401 (+)
G25827 NA non-coding upstream 964866 28104602 ~ 28109590 (+)
G25819 NA non-coding upstream 996335 28070346 ~ 28078121 (+)
G25753 NA non-coding upstream 1502965 27570543 ~ 27571491 (+)
G25709 ppib,LOC102792920,LOC107680152,LOC107577199,LOC107754356,LOC107673286 non-coding upstream 1505103 27566695 ~ 27569353 (+)
G26146 NA non-coding downstream 229242 29311623 ~ 29311944 (+)
G26167 NA non-coding downstream 284992 29367373 ~ 29367723 (+)
G26171 NA non-coding downstream 291995 29374376 ~ 29375878 (+)
G26196 LOC107575789 non-coding downstream 457302 29539683 ~ 29540062 (+)
G26243 LOC106587622,LOC106562410 non-coding downstream 644013 29726394 ~ 29729537 (+)
AMCG00007769 acsbg1 other upstream 68077 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 162890 28900058 ~ 28911566 (+)
AMCG00007754 NA other upstream 374394 28682171 ~ 28700062 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other upstream 619749 28438644 ~ 28454707 (+)
G25822 NA other upstream 979715 28083822 ~ 28094741 (+)
AMCG00007788 NA other downstream 539930 29622311 ~ 29724734 (+)
G26258 tpm1,tpma,LOC108237348 other downstream 672659 29755040 ~ 29819552 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 2331773 31414154 ~ 31440378 (+)
AMCG00007854 NA other downstream 4681132 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 6528601 35610982 ~ 35620801 (+)

Expression


Co-expression Network