G26115


Basic Information

Item Value
gene id G26115
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29230943 ~ 29232708 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU32768
ACTTTCAGGGATCATTTCTATAGTCCGTGACTGGAGAAATGCGTTTCTAAAGTGACTGGTCTCGCTGACCCCGATGAGGAGCCGTAGCGCCCCCTCCTGAGCGCGAAGCGGGCCCGCGGCTGCACTGCGGCTGCGCGGCCATTGATGACCGTTCCTCCCCCCCGGGGGCAGGAGGGAGGGGGCGCGTGCTGAGTGtaaaaaaaaatatgactaTGATTTTGAGGAGCTCATTGGATGTCAGCatcagtacaatacaatacaacttaATGTGGGAGGATTTTCTTTATGTCCCTCCACTATTAGGATAATCAAACTTGGAGGTATTTATTTAAGAGATTGTcctcatttttaaatacaa

Function

GO: NA

KEGG:

id description
ko04672 Intestinal immune network for IgA production

RNA

RNA id representative length rna type GC content exon number start site end site
TU32768 True 358 lncRNA 0.49 2 29230943 29232708

Neighbor

gene id symbol gene type direction distance location
AMCG00007771 frmd5,LOC108435336,LOC107562133 coding downstream 108630 29114380 ~ 29122313 (-)
AMCG00007770 frmd5,LOC108435336,LOC102299895 coding downstream 130454 29080151 ~ 29100489 (-)
AMCG00007759 cib2,LOC107757746,LOC107598895,LOC107698385,LOC107573330,LOC107752320 coding downstream 270839 28951619 ~ 28960104 (-)
AMCG00007760 dapk2a coding downstream 352926 28866604 ~ 28878017 (-)
AMCG00007761 NA coding downstream 364358 28862578 ~ 28866585 (-)
AMCG00007772 NA coding upstream 1051 29233759 ~ 29256619 (-)
AMCG00007779 NA coding upstream 56361 29289069 ~ 29296557 (-)
AMCG00007780 NA coding upstream 143538 29376246 ~ 29377079 (-)
AMCG00007778 NA coding upstream 146336 29379044 ~ 29386305 (-)
AMCG00007783 NA coding upstream 172680 29405388 ~ 29427475 (-)
G26092 NA non-coding downstream 181778 29031410 ~ 29049165 (-)
G25987 NA non-coding downstream 496494 28734112 ~ 28734449 (-)
G25985 NA non-coding downstream 497949 28732764 ~ 28732994 (-)
G25968 NA non-coding downstream 528406 28676840 ~ 28702537 (-)
G25972 NA non-coding downstream 531094 28696465 ~ 28699849 (-)
G26147 NA non-coding upstream 78910 29311618 ~ 29311943 (-)
G26165 NA non-coding upstream 132916 29365624 ~ 29366245 (-)
G26231 NA non-coding upstream 375609 29608317 ~ 29608596 (-)
G26342 NA non-coding upstream 1172290 30404998 ~ 30454628 (-)
G26352 anx2a,LOC105029377,LOC108433632 non-coding upstream 1199098 30431806 ~ 30437988 (-)
AMCG00007768 NA other downstream 216996 29001049 ~ 29013947 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other downstream 309820 28894693 ~ 28921123 (-)
AMCG00007704 NA other downstream 1860424 27357731 ~ 27370519 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other downstream 3160095 26053764 ~ 26070848 (-)
AMCG00007684 shf,LOC108430988 other downstream 3599351 25630792 ~ 25631592 (-)
AMCG00007817 NA other upstream 1959302 31192010 ~ 31246649 (-)
AMCG00007822 NA other upstream 2106008 31338716 ~ 31342792 (-)
AMCG00007835 LOC107594750 other upstream 2572191 31804899 ~ 31816151 (-)
G26961 LOC101154678 other upstream 5636727 34869435 ~ 34869807 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other upstream 6770485 36003193 ~ 36010995 (-)

Expression


Co-expression Network