G26146


Basic Information

Item Value
gene id G26146
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 29311623 ~ 29311944 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU32804
cgctactccactgctccgctccctccactggctcccgatagcggcacgcattcagttcaagactttgaccctcacctaccgctgtctcgaccacactgcaccaagctaccttcagtcactcgtctctccatacatcccctccagaccactgcgctcctccagtgccagaaggctaactctgcctcctctccactctccttcctccagagccgctccttctcatccctgaaccctaaatggtggaacgacctgcccaccgaagtcaaaacagcagagtccttgacctcattccggcgcttactcaagacgcatctcttccgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32804 True 322 lncRNA 0.57 1 29311623 29311944

Neighbor

gene id symbol gene type direction distance location
AMCG00007774 NA coding upstream 22930 29258430 ~ 29288693 (+)
AMCG00007766 NA coding upstream 240167 29059031 ~ 29071456 (+)
AMCG00007764 blm coding upstream 256172 29032754 ~ 29055451 (+)
AMCG00007765 NA coding upstream 279416 29024785 ~ 29032207 (+)
AMCG00007767 idh3a,LOC107757767,LOC107659502,LOC103353692,LOC102780018 coding upstream 311538 28989713 ~ 29000085 (+)
AMCG00007775 NA coding downstream 9287 29321231 ~ 29336890 (+)
AMCG00007773 sec11a,LOC107691153 coding downstream 27702 29339646 ~ 29342580 (+)
AMCG00007776 NA coding downstream 39126 29351070 ~ 29351882 (+)
AMCG00007777 kti12,LOC107562123,LOC107715238,LOC107725737 coding downstream 43107 29355051 ~ 29361487 (+)
AMCG00007781 tspan3,tspan3a,LOC107690355 coding downstream 80963 29392907 ~ 29402001 (+)
G26103 frmd5,LOC107691145,LOC107556247,LOC103373640,LOC570903 non-coding upstream 229242 29074456 ~ 29082381 (+)
G25984 NA non-coding upstream 580222 28731130 ~ 28731401 (+)
G25827 NA non-coding upstream 1202033 28104602 ~ 28109590 (+)
G25819 NA non-coding upstream 1233502 28070346 ~ 28078121 (+)
G25753 NA non-coding upstream 1740132 27570543 ~ 27571491 (+)
G26167 NA non-coding downstream 55429 29367373 ~ 29367723 (+)
G26171 NA non-coding downstream 62432 29374376 ~ 29375878 (+)
G26196 LOC107575789 non-coding downstream 227739 29539683 ~ 29540062 (+)
G26243 LOC106587622,LOC106562410 non-coding downstream 414450 29726394 ~ 29729537 (+)
G26249 NA non-coding downstream 426758 29738702 ~ 29741082 (+)
AMCG00007769 acsbg1 other upstream 305244 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 400057 28900058 ~ 28911566 (+)
AMCG00007754 NA other upstream 611561 28682171 ~ 28700062 (+)
AMCG00007735 LOC104966693,LOC107388733,LOC105916711,LOC106514397,LOC105007422,LOC106561846 other upstream 856916 28438644 ~ 28454707 (+)
G25822 NA other upstream 1216882 28083822 ~ 28094741 (+)
AMCG00007788 NA other downstream 310367 29622311 ~ 29724734 (+)
G26258 tpm1,tpma,LOC108237348 other downstream 443096 29755040 ~ 29819552 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 2102210 31414154 ~ 31440378 (+)
AMCG00007854 NA other downstream 4451569 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 6299038 35610982 ~ 35620801 (+)

Expression


Co-expression Network