G26360


Basic Information

Item Value
gene id G26360
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 30510535 ~ 30522510 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU33060
CAAAGGGGTGAAAAGGCTCAGCAACCGGAATTGAAGTGTGATGGCACCCAGTAACAGTGTGTGAAGGTATGCACTAACCTTTCTGTGGACTTCGCAGGGTGCTTAGTCTACAATTCACACTTACAAATGGAGCTACTGAGCAATGGGATGTTTGACATGGAAATTGCCTGCCTGCTCCCCTCTCAGGCGCTCAGGAGTCCTCACCATAATCGAGAGTCCCTGTACCCCTGCAGTCACAAAAGACTAGCGACATTAGGACCGTGATGAGGCTGTCAGATGCTGCGGAGAAGcatcattataattgtataattaaaatgtttcacttcTGTACCATTAAGTTGATTTCTCCTGAACACTGCTGAAAAAGTATACTTTGTAAACCGCAGACATGCACTAGGTGGATTCCCTTATAAAGCAtctaaacaataataaaaaaataaaactgcagtgaaacaaagatttttattaaaacattattttcctaatCAAACTTGACACAATAAGAAAATGTCTCCTGacagaagaaatgcaatgaAGCACTACTAGACATTGCCTTAAACTGCAACGAAGtttgcaagatttttttttttaattacatcattTGTTG

Function

GO: NA

KEGG:

id description
ko00260 Glycine, serine and threonine metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU33060 True 607 lncRNA 0.40 3 30510535 30522510

Neighbor

gene id symbol gene type direction distance location
AMCG00007800 anx2a,anxa2,LOC108433632 coding upstream 72402 30429840 ~ 30438133 (+)
AMCG00007799 NA coding upstream 81405 30409031 ~ 30429130 (+)
AMCG00007798 rora,LOC103141220,LOC106561150 coding upstream 109432 30388193 ~ 30401103 (+)
AMCG00007797 vps13c coding upstream 467354 29945120 ~ 30043181 (+)
AMCG00007796 NA coding upstream 568704 29929748 ~ 29941831 (+)
AMCG00007802 bnip2,LOC107703138 coding downstream 67704 30590214 ~ 30608023 (+)
AMCG00007806 gtf2a2 coding downstream 87708 30610218 ~ 30613192 (+)
AMCG00007805 otud7a,LOC107715690,LOC107659507,LOC107550219,LOC107752330,LOC107698115,LOC107598848,LOC108275340 coding downstream 209101 30731611 ~ 30774461 (+)
AMCG00007809 LOC107674425 coding downstream 360406 30882916 ~ 30915465 (+)
AMCG00007808 rps27,LOC104929087,LOC106605899,LOC108429942,LOC107084035,LOC100696027 coding downstream 418689 30941199 ~ 30943727 (+)
G26319 NA non-coding upstream 103888 30402565 ~ 30406647 (+)
G26262 NA non-coding upstream 706932 29799757 ~ 29803603 (+)
G26249 NA non-coding upstream 769453 29738702 ~ 29741082 (+)
G26243 LOC106587622,LOC106562410 non-coding upstream 780998 29726394 ~ 29729537 (+)
G26196 LOC107575789 non-coding upstream 970473 29539683 ~ 29540062 (+)
G26430 NA non-coding downstream 421791 30944301 ~ 30945248 (+)
G26429 dnaja4,LOC107659503,LOC104917859 non-coding downstream 422793 30945303 ~ 30946095 (+)
G26433 NA non-coding downstream 433128 30955638 ~ 30955893 (+)
G26458 NA non-coding downstream 577761 31100271 ~ 31100516 (+)
G26461 NA non-coding downstream 581444 31103954 ~ 31106021 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 690983 29755040 ~ 29819552 (+)
AMCG00007788 NA other upstream 785801 29622311 ~ 29724734 (+)
AMCG00007769 acsbg1 other upstream 1504156 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 1598969 28900058 ~ 28911566 (+)
AMCG00007754 NA other upstream 1810473 28682171 ~ 28700062 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 891644 31414154 ~ 31440378 (+)
AMCG00007854 NA other downstream 3241003 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 5088472 35610982 ~ 35620801 (+)
AMCG00007889 NA other downstream 5773708 36296218 ~ 36302841 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 6681360 37203870 ~ 37216558 (+)

Expression


Co-expression Network