G26370


Basic Information

Item Value
gene id G26370
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 30610218 ~ 30611693 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU33076
ACTGTGCCGAGACCTGGGCGTCCTGGAAAGCACGGTACTCACCCGAAAGTTGACCCGATTGCGCACCCTATTCGCCAGCGCTGTGTTAATGGCTTTATCAAACTGAAGGAGCACCTGGAGTGCAAGCTGTGGAGTGATCTGTTGGGTCTGAATGAGTTCGTCCAGACTCTCCTGCAGACTGTTCCCCAGGGTGGTATTTCTGTAAAGCTGGTATGCCATTTTATCTAACTGTCTGAGTAGTAATACCAAGGTTACAAGCCCTTGTTGTTAATATAATCAAAACTCCCTCGTACTGGTATTTCCCTTCCCCGTCCTGTTGTTGTCTCTTAAACAGGAAGCATAAACCCGGTACACAGAGTACGGCACACCGAGAAGGACAAACATGACGAAGAGCGCGGACCTTCACGCTGTGGACTTGTTCGTGCTGGAGTGCGGCGTTTCGGAgcacctttattttaaaatgcagttattgTGATAGAGAAATTCAAC

Function

GO:

id name namespace
GO:0007049 cell cycle biological_process
GO:0051301 cell division biological_process

KEGG:

id description
ko04110 Cell cycle
ko04114 Oocyte meiosis

RNA

RNA id representative length rna type GC content exon number start site end site
TU33076 True 489 lncRNA 0.48 2 30610218 30611693

Neighbor

gene id symbol gene type direction distance location
AMCG00007801 foxb1,LOC103353681 coding downstream 100716 30508882 ~ 30509502 (-)
AMCG00007795 LOC103354956,LOC102781786,LOC102208509 coding downstream 745607 29799746 ~ 29864611 (-)
AMCG00007793 tpm1 coding downstream 835265 29765938 ~ 29774953 (-)
AMCG00007792 tpm1 coding downstream 844363 29757456 ~ 29765855 (-)
AMCG00007790 NA coding downstream 859639 29738738 ~ 29750579 (-)
AMCG00007804 NA coding upstream 2296 30613989 ~ 30614885 (-)
AMCG00007803 NA coding upstream 7725 30619418 ~ 30639376 (-)
AMCG00007807 NA coding upstream 199101 30810794 ~ 30830616 (-)
AMCG00007810 rab8b,LOC106609700,LOC107585968,LOC108441837 coding upstream 304667 30916360 ~ 30924500 (-)
AMCG00007811 dnaja4,LOC108229883,LOC107099226 coding upstream 332919 30944612 ~ 30947926 (-)
G26342 NA non-coding downstream 155590 30404998 ~ 30454628 (-)
G26352 anx2a,LOC105029377,LOC108433632 non-coding downstream 172230 30431806 ~ 30437988 (-)
G26231 NA non-coding downstream 1001622 29608317 ~ 29608596 (-)
G26165 NA non-coding downstream 1243973 29365624 ~ 29366245 (-)
G26147 NA non-coding downstream 1298275 29311618 ~ 29311943 (-)
G26403 NA non-coding upstream 188718 30800411 ~ 30875378 (-)
G26416 NA non-coding upstream 291976 30903669 ~ 30903895 (-)
G26598 NA non-coding upstream 1074078 31685771 ~ 31686432 (-)
G26626 NA non-coding upstream 1169945 31781638 ~ 31781891 (-)
G26646 NA non-coding upstream 1211049 31822742 ~ 31822969 (-)
AMCG00007768 NA other downstream 1596271 29001049 ~ 29013947 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other downstream 1689095 28894693 ~ 28921123 (-)
AMCG00007704 NA other downstream 3239699 27357731 ~ 27370519 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other downstream 4539370 26053764 ~ 26070848 (-)
AMCG00007684 shf,LOC108430988 other downstream 4978626 25630792 ~ 25631592 (-)
AMCG00007817 NA other upstream 580317 31192010 ~ 31246649 (-)
AMCG00007822 NA other upstream 727023 31338716 ~ 31342792 (-)
AMCG00007835 LOC107594750 other upstream 1193206 31804899 ~ 31816151 (-)
G26961 LOC101154678 other upstream 4257742 34869435 ~ 34869807 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other upstream 5391500 36003193 ~ 36010995 (-)

Expression


Co-expression Network