G26458


Basic Information

Item Value
gene id G26458
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 31100271 ~ 31100516 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU33175
gtcaGGTTGGCTCCATTCATAAATCCAAGGCTTACCTGTTATGACTTTGTTGGATATCATCAgaccattttattaaatgttgcattacacaacacaaaaagcTATGTGGATAAGAGGAAAGTGCCAAACTTTAAAGGAATGTATATCACATGTCTGATTAATTTTGCAGTGAAAACAGGGAGTGATCGCCATAATTGCTTCAGGGCATTGTGTTGCCCAAACCCAGTCTTTCAGGAAACAGAGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33175 True 246 lncRNA 0.39 1 31100271 31100516

Neighbor

gene id symbol gene type direction distance location
AMCG00007816 NA coding upstream 1914 31096738 ~ 31098357 (+)
AMCG00007808 rps27,LOC104929087,LOC106605899,LOC108429942,LOC107084035,LOC100696027 coding upstream 156544 30941199 ~ 30943727 (+)
AMCG00007809 LOC107674425 coding upstream 184806 30882916 ~ 30915465 (+)
AMCG00007805 otud7a,LOC107715690,LOC107659507,LOC107550219,LOC107752330,LOC107698115,LOC107598848,LOC108275340 coding upstream 325810 30731611 ~ 30774461 (+)
AMCG00007806 gtf2a2 coding upstream 487079 30610218 ~ 30613192 (+)
AMCG00007813 idh2,LOC107714782,LOC107691122,LOC107715227 coding downstream 11129 31111645 ~ 31136247 (+)
AMCG00007818 LOC106573467,LOC106561177 coding downstream 170159 31270675 ~ 31302984 (+)
AMCG00007820 NA coding downstream 204520 31305036 ~ 31317396 (+)
AMCG00007819 NA coding downstream 224566 31325082 ~ 31339183 (+)
AMCG00007825 NA coding downstream 395423 31495939 ~ 31497811 (+)
G26433 NA non-coding upstream 144378 30955638 ~ 30955893 (+)
G26429 dnaja4,LOC107659503,LOC104917859 non-coding upstream 154176 30945303 ~ 30946095 (+)
G26430 NA non-coding upstream 155023 30944301 ~ 30945248 (+)
G26360 NA non-coding upstream 577761 30510535 ~ 30522510 (+)
G26319 NA non-coding upstream 693624 30402565 ~ 30406647 (+)
G26461 NA non-coding downstream 3438 31103954 ~ 31106021 (+)
G26462 NA non-coding downstream 5898 31106414 ~ 31106624 (+)
G26463 NA non-coding downstream 6198 31106714 ~ 31107249 (+)
G26483 NA non-coding downstream 117594 31218110 ~ 31218322 (+)
G26625 NA non-coding downstream 681122 31781638 ~ 31781891 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 1280719 29755040 ~ 29819552 (+)
AMCG00007788 NA other upstream 1375537 29622311 ~ 29724734 (+)
AMCG00007769 acsbg1 other upstream 2093892 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 2188705 28900058 ~ 28911566 (+)
AMCG00007754 NA other upstream 2400209 28682171 ~ 28700062 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other downstream 313638 31414154 ~ 31440378 (+)
AMCG00007854 NA other downstream 2662997 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 4510466 35610982 ~ 35620801 (+)
AMCG00007889 NA other downstream 5195702 36296218 ~ 36302841 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 6103354 37203870 ~ 37216558 (+)

Expression


Co-expression Network