G26625


Basic Information

Item Value
gene id G26625
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 31781638 ~ 31781891 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU33371
ctacatgtgtgatctcgcgttttttgttttgctttttacaatgAGTTTGGTTGTGATGTATAATAGGGTTTAAGGTCGCagtcctcggtgctgattattactgCTGTGTGTGACGCTGAATGAGTTTGGTTGTGATGTATAATAGGGTTTAAGGTCGCagtcctcggtgctgattattactgctgtgtttctcttctactccgcgcttgggaacgcccacaccagtgacgtcagcattcggttccaaaaccggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33371 True 254 lncRNA 0.45 1 31781638 31781891

Neighbor

gene id symbol gene type direction distance location
AMCG00007829 LOC102800273,LOC107557431 coding upstream 98303 31664646 ~ 31683335 (+)
AMCG00007828 NA coding upstream 119046 31654997 ~ 31662592 (+)
AMCG00007830 hcn4 coding upstream 162760 31580726 ~ 31618878 (+)
AMCG00007832 hcn4,LOC108263998,LOC102197830,LOC105930179 coding upstream 222183 31556435 ~ 31559455 (+)
AMCG00007833 hcn4,LOC102793391 coding upstream 245629 31535329 ~ 31536009 (+)
AMCG00007834 det1,LOC107654110,LOC107707445,LOC107701843 coding downstream 13082 31794973 ~ 31800664 (+)
AMCG00007838 NA coding downstream 34352 31816243 ~ 31818992 (+)
AMCG00007840 NA coding downstream 423115 32205006 ~ 32219672 (+)
AMCG00007839 LOC108438531,LOC107714007,LOC108269325,LOC107654144 coding downstream 543731 32325622 ~ 32356646 (+)
AMCG00007837 ntrk3,LOC106573628,LOC107581857,LOC107573919,LOC108269325 coding downstream 610714 32392605 ~ 32398918 (+)
G26483 NA non-coding upstream 563316 31218110 ~ 31218322 (+)
G26463 NA non-coding upstream 674389 31106714 ~ 31107249 (+)
G26462 NA non-coding upstream 675014 31106414 ~ 31106624 (+)
G26461 NA non-coding upstream 675617 31103954 ~ 31106021 (+)
G26458 NA non-coding upstream 681122 31100271 ~ 31100516 (+)
G26645 NA non-coding downstream 40849 31822740 ~ 31822973 (+)
G26698 NA non-coding downstream 840369 32622260 ~ 32622530 (+)
G26704 NA non-coding downstream 1105899 32887790 ~ 32888040 (+)
G26826 NA non-coding downstream 2207155 33989046 ~ 33990588 (+)
G26825 NA non-coding downstream 2210287 33992178 ~ 33993982 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 341260 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 1962086 29755040 ~ 29819552 (+)
AMCG00007788 NA other upstream 2056904 29622311 ~ 29724734 (+)
AMCG00007769 acsbg1 other upstream 2775259 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 2870072 28900058 ~ 28911566 (+)
AMCG00007854 NA other downstream 1981622 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 3829091 35610982 ~ 35620801 (+)
AMCG00007889 NA other downstream 4514327 36296218 ~ 36302841 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 5421979 37203870 ~ 37216558 (+)
G27518 NA other downstream 6363093 38144984 ~ 38146850 (+)

Expression


Co-expression Network