G26645


Basic Information

Item Value
gene id G26645
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 31822740 ~ 31822973 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU33398
ttcatctagttctattcctcccatagtgtaattatagtggacatttttgttacctgcatgtattaccttgcacttgtccacattgaatttcatctgccaggtgtcggcccacaactgaatattatctaagtccctttgaatagcctgtgctgccgagattgtatctgctgagccacctattttagtatcatctgcaaatttgacaagtttgcaaactatcccagagtccagatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33398 True 234 lncRNA 0.41 1 31822740 31822973

Neighbor

gene id symbol gene type direction distance location
AMCG00007838 NA coding upstream 3748 31816243 ~ 31818992 (+)
AMCG00007834 det1,LOC107654110,LOC107707445,LOC107701843 coding upstream 22076 31794973 ~ 31800664 (+)
AMCG00007829 LOC102800273,LOC107557431 coding upstream 139405 31664646 ~ 31683335 (+)
AMCG00007828 NA coding upstream 160148 31654997 ~ 31662592 (+)
AMCG00007830 hcn4 coding upstream 203862 31580726 ~ 31618878 (+)
AMCG00007840 NA coding downstream 382033 32205006 ~ 32219672 (+)
AMCG00007839 LOC108438531,LOC107714007,LOC108269325,LOC107654144 coding downstream 502649 32325622 ~ 32356646 (+)
AMCG00007837 ntrk3,LOC106573628,LOC107581857,LOC107573919,LOC108269325 coding downstream 569632 32392605 ~ 32398918 (+)
AMCG00007841 NA coding downstream 705829 32528802 ~ 32850205 (+)
AMCG00007845 klhl25,LOC106560960,LOC107714043 coding downstream 1527121 33350094 ~ 33357685 (+)
G26625 NA non-coding upstream 40849 31781638 ~ 31781891 (+)
G26483 NA non-coding upstream 604418 31218110 ~ 31218322 (+)
G26463 NA non-coding upstream 715491 31106714 ~ 31107249 (+)
G26462 NA non-coding upstream 716116 31106414 ~ 31106624 (+)
G26461 NA non-coding upstream 716719 31103954 ~ 31106021 (+)
G26698 NA non-coding downstream 799287 32622260 ~ 32622530 (+)
G26704 NA non-coding downstream 1064817 32887790 ~ 32888040 (+)
G26826 NA non-coding downstream 2166073 33989046 ~ 33990588 (+)
G26825 NA non-coding downstream 2169205 33992178 ~ 33993982 (+)
G26875 NA non-coding downstream 2426223 34249196 ~ 34253554 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 382362 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 2003188 29755040 ~ 29819552 (+)
AMCG00007788 NA other upstream 2098006 29622311 ~ 29724734 (+)
AMCG00007769 acsbg1 other upstream 2816361 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 2911174 28900058 ~ 28911566 (+)
AMCG00007854 NA other downstream 1940540 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 3788009 35610982 ~ 35620801 (+)
AMCG00007889 NA other downstream 4473245 36296218 ~ 36302841 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 5380897 37203870 ~ 37216558 (+)
G27518 NA other downstream 6322011 38144984 ~ 38146850 (+)

Expression


Co-expression Network