G26698


Basic Information

Item Value
gene id G26698
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 32622260 ~ 32622530 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU33452
gttgagctgtggcagcgagtttatggttcaggtgagagagagagagaaagagagagaccgTGTGCTGTTCTTTAtatgtcagatcaataggtgattgagtttgtgagattggatttcggtttcagcccccagtgtcgtattggaggggggcttgatttatgactgatgtcaatccatgccatcttttggaaatgccggttggcacgggttcgtagctctgtgtcgggatttcggctctcgtccatttcaaagagtttttattacctacagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33452 True 271 lncRNA 0.47 1 32622260 32622530

Neighbor

gene id symbol gene type direction distance location
AMCG00007837 ntrk3,LOC106573628,LOC107581857,LOC107573919,LOC108269325 coding upstream 223342 32392605 ~ 32398918 (+)
AMCG00007839 LOC108438531,LOC107714007,LOC108269325,LOC107654144 coding upstream 265614 32325622 ~ 32356646 (+)
AMCG00007840 NA coding upstream 402588 32205006 ~ 32219672 (+)
AMCG00007838 NA coding upstream 803268 31816243 ~ 31818992 (+)
AMCG00007834 det1,LOC107654110,LOC107707445,LOC107701843 coding upstream 821596 31794973 ~ 31800664 (+)
AMCG00007845 klhl25,LOC106560960,LOC107714043 coding downstream 727564 33350094 ~ 33357685 (+)
AMCG00007846 NA coding downstream 996773 33619303 ~ 33640336 (+)
AMCG00007847 LOC108243329,LOC107714027,LOC107654092,LOC100696938 coding downstream 1023989 33646519 ~ 33647508 (+)
AMCG00007853 si:dkey-12e7.1,LOC105904526,LOC108427511,LOC103035474,LOC106573761,LOC107583743,LOC107738678 coding downstream 1136173 33758703 ~ 33759842 (+)
AMCG00007857 igf1ra,igf1r,LOC101079603,LOC105904485,LOC106949861 coding downstream 1244433 33866963 ~ 33870738 (+)
G26645 NA non-coding upstream 799287 31822740 ~ 31822973 (+)
G26625 NA non-coding upstream 840369 31781638 ~ 31781891 (+)
G26483 NA non-coding upstream 1403938 31218110 ~ 31218322 (+)
G26463 NA non-coding upstream 1515011 31106714 ~ 31107249 (+)
G26462 NA non-coding upstream 1515636 31106414 ~ 31106624 (+)
G26704 NA non-coding downstream 265260 32887790 ~ 32888040 (+)
G26826 NA non-coding downstream 1366516 33989046 ~ 33990588 (+)
G26825 NA non-coding downstream 1369648 33992178 ~ 33993982 (+)
G26875 NA non-coding downstream 1626666 34249196 ~ 34253554 (+)
G26895 NA non-coding downstream 1643591 34266121 ~ 34266418 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 1181882 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 2802708 29755040 ~ 29819552 (+)
AMCG00007788 NA other upstream 2897526 29622311 ~ 29724734 (+)
AMCG00007769 acsbg1 other upstream 3615881 29003095 ~ 29006379 (+)
AMCG00007763 tbc1d2b other upstream 3710694 28900058 ~ 28911566 (+)
AMCG00007854 NA other downstream 1140983 33763513 ~ 33794941 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other downstream 2988452 35610982 ~ 35620801 (+)
AMCG00007889 NA other downstream 3673688 36296218 ~ 36302841 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 4581340 37203870 ~ 37216558 (+)
G27518 NA other downstream 5522454 38144984 ~ 38146850 (+)

Expression


Co-expression Network