G26952


Basic Information

Item Value
gene id G26952
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 34816694 ~ 34816920 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU33762
TGAAAATGCagagtgatttttcttttcagggcTATTACACTGAGTTATTTAACATCATGGTTTCAGAAAAGAGTTAATATTCAGGGCCTTTAATGGGCTACAATCTATAACAAGCATAAAAAGTAAACAGACACTCCTACTTCTCATCTGGCACCAAGTCAGTTCTTATTTAAGATAGGCAAATACAACAATGCATCTCATTAAACACTGAGATTGAAATGGAAATC

Function

GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU33762 True 227 lncRNA 0.34 1 34816694 34816920

Neighbor

gene id symbol gene type direction distance location
AMCG00007869 nr2f2,LOC107690378,LOC107549018 coding downstream 11816 34796895 ~ 34804878 (-)
AMCG00007861 NA coding downstream 773798 34011110 ~ 34042896 (-)
AMCG00007862 NA coding downstream 816956 33995712 ~ 33999738 (-)
AMCG00007859 NA coding downstream 878614 33922475 ~ 33938080 (-)
AMCG00007856 NA coding downstream 1002761 33800570 ~ 33813933 (-)
AMCG00007874 chd2,LOC107715217,LOC107690375 coding upstream 739330 35556250 ~ 35594137 (-)
AMCG00007875 NA coding upstream 808890 35625810 ~ 35637920 (-)
AMCG00007876 LOC107601651,LOC107690372,LOC103369184 coding upstream 832924 35649844 ~ 35665471 (-)
AMCG00007877 LOC105016671,LOC103369184,LOC102786692,LOC101476567,LOC102297530,LOC100700148,LOC106588105 coding upstream 901104 35718024 ~ 35735817 (-)
AMCG00007880 NA coding upstream 1023233 35840153 ~ 35852765 (-)
G26943 NA non-coding downstream 19841 34796169 ~ 34796853 (-)
G26893 NA non-coding downstream 563129 34249199 ~ 34253565 (-)
G26883 mef2a non-coding downstream 593463 34189496 ~ 34223231 (-)
G26848 NA non-coding downstream 822736 33992135 ~ 33993958 (-)
G26847 NA non-coding downstream 828703 33986547 ~ 33987991 (-)
G26994 NA non-coding upstream 714010 35530930 ~ 35531438 (-)
G26995 NA non-coding upstream 720384 35537304 ~ 35537636 (-)
G26997 NA non-coding upstream 733951 35550871 ~ 35552507 (-)
G27023 NA non-coding upstream 778510 35595430 ~ 35603175 (-)
G27107 NA non-coding upstream 1209803 36026723 ~ 36026983 (-)
AMCG00007835 LOC107594750 other downstream 3000543 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 3473902 31338716 ~ 31342792 (-)
AMCG00007817 NA other downstream 3570045 31192010 ~ 31246649 (-)
AMCG00007768 NA other downstream 5802747 29001049 ~ 29013947 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other downstream 5895571 28894693 ~ 28921123 (-)
G26961 LOC101154678 other upstream 52515 34869435 ~ 34869807 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other upstream 1186273 36003193 ~ 36010995 (-)
AMCG00007907 NA other upstream 2025555 36842475 ~ 36846583 (-)
AMCG00007929 NA other upstream 2423164 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 2677991 37494911 ~ 37499392 (-)

Expression


Co-expression Network