G27079


Basic Information

Item Value
gene id G27079
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 35903044 ~ 35903259 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU33907
tccaatcttgtaatcagtcattcagcctatttaaatggaggaaagtagtcactgtgccgtttggtatcattgtgtgcaccacactgaacatggaccagagaaagcaaaggagagagttgtctgaggagatcagaaagaaaataatagacaagcatggtaaaggtaaaggctacaagaccatctccaagcagcttgatgttcctgtgacaacagatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33907 True 216 lncRNA 0.42 1 35903044 35903259

Neighbor

gene id symbol gene type direction distance location
AMCG00007878 si:dkeyp-59c12.1,LOC106561194,LOC108431221,LOC107690407,LOC107549016,LOC107715600,LOC107693031 coding upstream 87977 35811726 ~ 35815067 (+)
AMCG00007872 LOC106561144,LOC106573775 coding upstream 354137 35537561 ~ 35548907 (+)
AMCG00007871 NA coding upstream 579154 35320619 ~ 35323890 (+)
AMCG00007870 NA coding upstream 674320 35222464 ~ 35228724 (+)
AMCG00007867 NA coding upstream 1549410 34348487 ~ 34353634 (+)
AMCG00007884 NA coding downstream 114428 36017687 ~ 36019684 (+)
AMCG00007888 NA coding downstream 381724 36284983 ~ 36294189 (+)
AMCG00007892 NA coding downstream 501409 36404668 ~ 36425781 (+)
AMCG00007896 NA coding downstream 581727 36484986 ~ 36489446 (+)
AMCG00007895 NA coding downstream 624106 36527365 ~ 36534128 (+)
G27052 NA non-coding upstream 60202 35807368 ~ 35842842 (+)
G27025 NA non-coding upstream 294407 35608423 ~ 35608637 (+)
G27021 NA non-coding upstream 299862 35595413 ~ 35603182 (+)
G26998 NA non-coding upstream 343485 35556145 ~ 35559559 (+)
G26993 NA non-coding upstream 350541 35550842 ~ 35552503 (+)
G27089 NA non-coding downstream 84042 35987301 ~ 36000934 (+)
G27108 NA non-coding downstream 126199 36029458 ~ 36030333 (+)
G27111 NA non-coding downstream 199037 36102296 ~ 36182722 (+)
G27139 NA non-coding downstream 402715 36305974 ~ 36306877 (+)
G27154 NA non-coding downstream 426161 36329420 ~ 36390820 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other upstream 282243 35610982 ~ 35620801 (+)
AMCG00007854 NA other upstream 2108103 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 4462666 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 6083492 29755040 ~ 29819552 (+)
AMCG00007788 NA other upstream 6178310 29622311 ~ 29724734 (+)
AMCG00007889 NA other downstream 392959 36296218 ~ 36302841 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 1300611 37203870 ~ 37216558 (+)
G27518 NA other downstream 2241725 38144984 ~ 38146850 (+)
AMCG00007952 romo1,LOC102788570 other downstream 2265311 38168570 ~ 38170146 (+)
AMCG00007957 raly other downstream 2452670 38355929 ~ 38423155 (+)

Expression


Co-expression Network