G27109


Basic Information

Item Value
gene id G27109
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36029469 ~ 36030312 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU33941
tttaaaatattatattctgcaaaaaataaattcccCCAATTCTGTTTCCACCAGAACTTCCTCAAAATGTTTGACAATTACAGTTTTTGGTGTTTGGCTTCCGCTACATGTTATTGTATCTCATAATCTGCATGGTTCTCCCTACAACAAAGCATAGCCTTAGTCCTTATTTTTGATCTTTTAAGGTAATGTTGATCCATCAGAAATGCGTATATTTGAAGTCTTTGTTACATGTCTCCTAGGATATGTTTGACAACAACTGCTGGTCTCTTCCCTCTGAGTGTGTCTGAAATTTAAAGCCTTTTATACAATATGTATAAATGGAGTGACTTCAAGTGTGGTATGCAGGCTTTTCAAAGACACGGCTGcacgaaaaacaaaaataataaaaatacaacaagatTGTAGAAAgtattgttaaatatgtttgtacaatattaaatgtttgttaaaaGACTAAAACACTAAGACAAGTGTTCTATTAGCAGTTTATGACCTAAATAACTATATCATACACAGTATAGAGAGGGGctgtttttaaagttatttgtaaaaacaaaaccataaatacagtcattgtgtacagtatgtaaatagaaaacacttattttaccCATCGTTGTGAAATCCTGTTCATACTTACTCAtctaatacaaatgttttgctGTGCAATACTGCAACCCCATTTTTGTGTGAGTCATCTTTATCTTGTTGTTCCTAAATCTTTCATTTCACTCACatctacatttttatattcacaTTGGTGGAAAGCTGTTGCCAAGGATACATTCCCTTTCAGAAGCACTCATTTtgcttatacatatatatataactgccCTCCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33941 True 844 lncRNA 0.33 1 36029469 36030312

Neighbor

gene id symbol gene type direction distance location
AMCG00007882 NA coding downstream 88040 35931242 ~ 35941429 (-)
AMCG00007879 NA coding downstream 170184 35855888 ~ 35859285 (-)
AMCG00007880 NA coding downstream 176704 35840153 ~ 35852765 (-)
AMCG00007877 LOC105016671,LOC103369184,LOC102786692,LOC101476567,LOC102297530,LOC100700148,LOC106588105 coding downstream 293652 35718024 ~ 35735817 (-)
AMCG00007876 LOC107601651,LOC107690372,LOC103369184 coding downstream 363998 35649844 ~ 35665471 (-)
AMCG00007886 NA coding upstream 8134 36038446 ~ 36060653 (-)
AMCG00007885 NA coding upstream 91958 36122270 ~ 36142643 (-)
AMCG00007887 NA coding upstream 149597 36179909 ~ 36267806 (-)
AMCG00007891 NA coding upstream 274094 36304406 ~ 36306372 (-)
AMCG00007890 LOC108439026 coding upstream 277252 36307564 ~ 36314143 (-)
G27107 NA non-coding downstream 2486 36026723 ~ 36026983 (-)
G27023 NA non-coding downstream 426294 35595430 ~ 35603175 (-)
G26997 NA non-coding downstream 476962 35550871 ~ 35552507 (-)
G26995 NA non-coding downstream 491833 35537304 ~ 35537636 (-)
G26994 NA non-coding downstream 498031 35530930 ~ 35531438 (-)
G27123 NA non-coding upstream 71994 36102306 ~ 36149276 (-)
G27173 NA non-coding upstream 332159 36362471 ~ 36364455 (-)
G27196 NA non-coding upstream 437774 36468086 ~ 36468452 (-)
G27197 NA non-coding upstream 460884 36491196 ~ 36491846 (-)
G27243 NA non-coding upstream 713756 36744068 ~ 36745866 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other downstream 18474 36003193 ~ 36010995 (-)
G26961 LOC101154678 other downstream 1159662 34869435 ~ 34869807 (-)
AMCG00007835 LOC107594750 other downstream 4213318 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 4686677 31338716 ~ 31342792 (-)
AMCG00007817 NA other downstream 4782820 31192010 ~ 31246649 (-)
AMCG00007907 NA other upstream 812163 36842475 ~ 36846583 (-)
AMCG00007929 NA other upstream 1209772 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 1464599 37494911 ~ 37499392 (-)
G27437 NA other upstream 1537305 37567617 ~ 37569284 (-)
G27439 NA other upstream 1540645 37570957 ~ 37571488 (-)

Expression


Co-expression Network