G27187


Basic Information

Item Value
gene id G27187
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36429406 ~ 36429931 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU34035
caaacatacaaaatcagcaggggatcaaatacttttttccctcactgtaagtctGCTTTATTCCAATCATACAGTGGTAATAAAATGGAGCTTTGTAAGAGATGTTTGTTCATGCATATCATGTAActtattcaaatgaaatgcatgctctCTTATGTATTACTTCTGTATTTTATCTGGTccttttcttattcattttttatgaaaGTGCCCTTACGTGAATGCATAACCCAATTGTTTTAacatagaaattaatttatattaaaaataaggcTGGTATACTTTCAATACTAGGCCTTATCATACAAGACTTTGGCTTTCAAAGCAGATACTCAAGTCAAAATGTAATGCCGAAAACTGTGAGATAATTCAAAAGCCCTGTTTGTAAGGATTTTATGATCATGTATCAGAAAGGAATAAGCTTTCTAAGGCACTGTGAATGtgtatatgttatatttttgtcCCAGTTGGGTGTGTGATTTGTTGTCTGGCAGTAACTTAATAAAGCTTTGTGCTGTAGATTATA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU34035 True 526 lncRNA 0.32 1 36429406 36429931

Neighbor

gene id symbol gene type direction distance location
AMCG00007892 NA coding upstream 3625 36404668 ~ 36425781 (+)
AMCG00007888 NA coding upstream 135217 36284983 ~ 36294189 (+)
AMCG00007884 NA coding upstream 409722 36017687 ~ 36019684 (+)
AMCG00007881 NA coding upstream 497918 35860631 ~ 35931488 (+)
AMCG00007878 si:dkeyp-59c12.1,LOC106561194,LOC108431221,LOC107690407,LOC107549016,LOC107715600,LOC107693031 coding upstream 614339 35811726 ~ 35815067 (+)
AMCG00007896 NA coding downstream 55055 36484986 ~ 36489446 (+)
AMCG00007895 NA coding downstream 97434 36527365 ~ 36534128 (+)
AMCG00007894 LOC106562351,LOC107554933 coding downstream 110652 36540583 ~ 36569423 (+)
AMCG00007897 csk,LOC107089925,LOC108264088,LOC103138042 coding downstream 193122 36623053 ~ 36644439 (+)
AMCG00007898 csk,LOC107089925,LOC106573028 coding downstream 214978 36644909 ~ 36646509 (+)
G27154 NA non-coding upstream 38586 36329420 ~ 36390820 (+)
G27139 NA non-coding upstream 122529 36305974 ~ 36306877 (+)
G27111 NA non-coding upstream 246684 36102296 ~ 36182722 (+)
G27108 NA non-coding upstream 399073 36029458 ~ 36030333 (+)
G27089 NA non-coding upstream 428472 35987301 ~ 36000934 (+)
G27216 NA non-coding downstream 255379 36685310 ~ 36727117 (+)
G27253 NA non-coding downstream 337722 36767653 ~ 36767939 (+)
G27263 NA non-coding downstream 414050 36843981 ~ 36845524 (+)
G27300 NA non-coding downstream 526251 36956182 ~ 36956454 (+)
G27334 NA non-coding downstream 662718 37092649 ~ 37093330 (+)
AMCG00007889 NA other upstream 126565 36296218 ~ 36302841 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other upstream 808605 35610982 ~ 35620801 (+)
AMCG00007854 NA other upstream 2634465 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 4989028 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 6609854 29755040 ~ 29819552 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 773939 37203870 ~ 37216558 (+)
G27518 NA other downstream 1715053 38144984 ~ 38146850 (+)
AMCG00007952 romo1,LOC102788570 other downstream 1738639 38168570 ~ 38170146 (+)
AMCG00007957 raly other downstream 1925998 38355929 ~ 38423155 (+)
G27551 NA other downstream 2002114 38432045 ~ 38436595 (+)

Expression


Co-expression Network