G27263


Basic Information

Item Value
gene id G27263
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36843981 ~ 36845524 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU34125
GCAGGTGCTGAGGCATGCTGGACTGAGACAGGCTATCCACCCAGCCCAGGAACAAATATAAAGACACTTAATGTCCCCTtcacaaaactggaaaaaaaacaacatgtaaatAAACCCATCATAAACCACTATCATTGGGAAATTACCAccttttttattactgttgcttatgcatttttaattcagcACTGCATTGTTCTTCTTACGGCCtttgttataaataaagaaGTCTTACCTCATTCATGATAAAAGAAAGTTCCAACATTTATAAgacaagttatttttctttttgaattgtTAACCACATTGACTGGAGCAAggtattgctttattttattattttctttaataattcCACACTGTATCTAAGAATATCTCACCGTGttgtatttcaaacaaatttgtcaataaaaaaggaacatgAAGAGTGTTGATATTATCATCTGTTATGTAGTACCTAATGCACACATGTTCTTGTGTTATTCAAAAACCAACACTAATGTTGAAATAGGTTACTTTTGGATcatgtatggatgatgttttgaatagaacaaaatgcaaacatgaCACTAACATGCTAAGGTAAATGCAAATTCTGAAATCAGGGATCTGAATGTGGATTTGAGAGCATGACATCCCTTCACTGAAATGTACCACTGCTTAATTAACTAAAAATCCcaacaaatatattgaatttattAGGGAATGTGTTTCTATAAAAATgtcttaaagaaataaacattctCAAGGTATGTGTGCAGGCAAAGCCTTAACTACTAAAGGCAGGGGCTGCACTGAGGGTTATACTAAACCTGCTAGTTGAAGAGAAAGCAGTAGCAAAAGAGATACAGTTATACAGTTAATTTACATGTCAATTTATAATTCTGTATTTGAGCCATTTTGAAACATGAAAGAGCGCACATATATCAAAGCTACAATGTcctttgtacatatttttgctttgtcaaaacctagaaaataaatagcatatttaatttcttatatattttaattaaattgcaattttgttgttgtttttaaatacgatatattacatttgactaattgaaaacaatgaacaattaaATCATCTTAAAAGTCAAACAACTGCTTTCAGGGAAGGGAATCCTGTAATGCAGGAGGAACCTGCACATTGTCCTTGAAGAATATTTTTAAGGGACTAGTAAGGAAGCAAGACCTGTCTAATGAAAACTACTGATCATAATGTCAGTTGCTGCATTGCTTGAATTTGAATCCCTTGAAGGTGGCCTCGGCATGCTGTTCATTTAGAGACAGGCTGTCTTGTTCAGTACCAGTTTGTGCAGGTGATCATAAAGCACATGTCGTCCACTCTCTTACTACCCATGCGGCACTGAGGCAGCTCTGTCCTCTGCCCCTGAGGGGTCTCTGCTGTCGGCCCCCGAGCGGTCTCTGCCACGACGGTGTTTGAGGGGGGCTCTGTGAGGACTGCGGAGGCCTGTGGTGTCACTGTGATGTCCTCTGGCGCTGCACTCCTCTCACAGCTCTGGCCTCCCCCCATTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34125 True 1544 lncRNA 0.37 1 36843981 36845524

Neighbor

gene id symbol gene type direction distance location
AMCG00007903 mmp24,LOC107723920,LOC107666082,LOC107587563,LOC107696473 coding upstream 2146 36815650 ~ 36841835 (+)
AMCG00007905 NA coding upstream 52243 36771612 ~ 36791738 (+)
AMCG00007900 tarsl2,LOC106587557 coding upstream 88153 36743984 ~ 36755828 (+)
AMCG00007902 NA coding upstream 125466 36717754 ~ 36718515 (+)
AMCG00007899 LOC106587555,LOC106562349 coding upstream 132594 36700805 ~ 36711387 (+)
AMCG00007906 eif6,if6,LOC107723919 coding downstream 2030 36847554 ~ 36855323 (+)
AMCG00007904 NA coding downstream 10104 36855628 ~ 36865482 (+)
AMCG00007912 NA coding downstream 83529 36929053 ~ 36939598 (+)
AMCG00007909 NA coding downstream 111135 36956659 ~ 36969735 (+)
AMCG00007914 NA coding downstream 177888 37023412 ~ 37034789 (+)
G27253 NA non-coding upstream 76042 36767653 ~ 36767939 (+)
G27216 NA non-coding upstream 116864 36685310 ~ 36727117 (+)
G27187 NA non-coding upstream 414050 36429406 ~ 36429931 (+)
G27154 NA non-coding upstream 453161 36329420 ~ 36390820 (+)
G27139 NA non-coding upstream 537104 36305974 ~ 36306877 (+)
G27300 NA non-coding downstream 110658 36956182 ~ 36956454 (+)
G27334 NA non-coding downstream 247125 37092649 ~ 37093330 (+)
G27400 blcap,bc10 non-coding downstream 649635 37495159 ~ 37499385 (+)
G27462 NA non-coding downstream 931541 37777065 ~ 37777462 (+)
G27489 NA non-coding downstream 1171344 38016868 ~ 38017144 (+)
AMCG00007889 NA other upstream 541140 36296218 ~ 36302841 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other upstream 1223180 35610982 ~ 35620801 (+)
AMCG00007854 NA other upstream 3049040 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 5403603 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 7024429 29755040 ~ 29819552 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 358346 37203870 ~ 37216558 (+)
G27518 NA other downstream 1299460 38144984 ~ 38146850 (+)
AMCG00007952 romo1,LOC102788570 other downstream 1323046 38168570 ~ 38170146 (+)
AMCG00007957 raly other downstream 1510405 38355929 ~ 38423155 (+)
G27551 NA other downstream 1586521 38432045 ~ 38436595 (+)

Expression


Co-expression Network