G27334


Basic Information

Item Value
gene id G27334
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 37092649 ~ 37093330 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU34204
cttttccaaacagattttccactggtttgaaggctccaaggttgtgcacaaaatcttcttgtaagcagggtttccaccgtagttacttgaagacaaagtctttgaggaaagcagggccctgtttggttccaagggtcaagtttcttaagactcaatagctatttaaatgactgacactttcgtattcagtcgacttagtcaattgtccagctgtaaaactccactgatcaggtgggcacaggcgggcagcgcagtctgtaaagttctttatttaataaagtcctttaaaataattcttcgtacggctcaatctccttctcccagtttgaCTCTTCTGTTGCCGACAAAGACTTAGTTTcatttctggttccggttctggcaacagagctacaggttgagctgtggcagcgagtttctggttcaggtgagagagagagagagagagatgccgtgcgctaccctttatacgcctgtcagatcaatagatgattggttcttgagtttttgagattagatttcggtttcagcccccagtgtcctattggaggggggcttgatttatgactgatgtcaatccatgccatcttttggaaatgccggttggcccgggttcgtagctctgtgtcgggatttcggctctcgtccacttcaaagagtttttattacctaaaggcccccttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34204 True 682 lncRNA 0.45 1 37092649 37093330

Neighbor

gene id symbol gene type direction distance location
AMCG00007918 NA coding upstream 6635 37085100 ~ 37086014 (+)
AMCG00007913 NA coding upstream 21216 37056836 ~ 37071433 (+)
AMCG00007917 NA coding upstream 40452 37040482 ~ 37052197 (+)
AMCG00007914 NA coding upstream 57860 37023412 ~ 37034789 (+)
AMCG00007909 NA coding upstream 122914 36956659 ~ 36969735 (+)
AMCG00007921 NA coding downstream 4596 37097926 ~ 37098855 (+)
AMCG00007919 NA coding downstream 20301 37113631 ~ 37117196 (+)
AMCG00007922 NA coding downstream 42337 37135667 ~ 37136216 (+)
AMCG00007930 NA coding downstream 75536 37168866 ~ 37171102 (+)
AMCG00007925 NA coding downstream 98652 37191982 ~ 37199824 (+)
G27300 NA non-coding upstream 136195 36956182 ~ 36956454 (+)
G27263 NA non-coding upstream 247125 36843981 ~ 36845524 (+)
G27253 NA non-coding upstream 324710 36767653 ~ 36767939 (+)
G27216 NA non-coding upstream 365532 36685310 ~ 36727117 (+)
G27187 NA non-coding upstream 662718 36429406 ~ 36429931 (+)
G27400 blcap,bc10 non-coding downstream 401829 37495159 ~ 37499385 (+)
G27462 NA non-coding downstream 683735 37777065 ~ 37777462 (+)
G27489 NA non-coding downstream 923538 38016868 ~ 38017144 (+)
G27497 NA non-coding downstream 934050 38027380 ~ 38027923 (+)
G27552 NA non-coding downstream 1346244 38439574 ~ 38439892 (+)
AMCG00007889 NA other upstream 789808 36296218 ~ 36302841 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other upstream 1471848 35610982 ~ 35620801 (+)
AMCG00007854 NA other upstream 3297708 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 5652271 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 7273097 29755040 ~ 29819552 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 110540 37203870 ~ 37216558 (+)
G27518 NA other downstream 1051654 38144984 ~ 38146850 (+)
AMCG00007952 romo1,LOC102788570 other downstream 1075240 38168570 ~ 38170146 (+)
AMCG00007957 raly other downstream 1262599 38355929 ~ 38423155 (+)
G27551 NA other downstream 1338715 38432045 ~ 38436595 (+)

Expression


Co-expression Network