G27335


Basic Information

Item Value
gene id G27335
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 37092649 ~ 37093300 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU34205
ttgaagtggacgagagccgaaatcccgacacagagctacgaacccgggccaaccggcatttccaaaagatggcatggattgacatcagtcataaatcaagcccccctccaataggacactgggggctgaaaccgaaatctaatctcaaaaactcaagaaccaatcatctattgatctgacaggcgtataaagggtagcgcacggcatctctctctctctctctctcacctgaaccagaaactcgctgccacagctcaacctgtagctctgttgccagaaccggaaccagaaatgAAACTAAGTCTTTGTCGGCAACAGAAGAGtcaaactgggagaaggagattgagccgtacgaagaattattttaaaggactttattaaataaagaactttacagactgcgctgcccgcctgtgcccacctgatcagtggagttttacagctggacaattgactaagtcgactgaatacgaaagtgtcagtcatttaaatagctattgagtcttaagaaacttgacccttggaaccaaacagggccctgctttcctcaaagactttgtcttcaagtaactacggtggaaaccctgcttacaagaagattttgtgcacaaccttggagccttcaaaccagtggaaaatctgtttggaaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34205 True 652 lncRNA 0.46 1 37092649 37093300

Neighbor

gene id symbol gene type direction distance location
AMCG00007916 NA coding downstream 68838 37013304 ~ 37023811 (-)
AMCG00007915 NA coding downstream 99675 36988663 ~ 36992974 (-)
AMCG00007910 gdf5 coding downstream 150781 36936827 ~ 36941868 (-)
AMCG00007911 LOC103464266,LOC105008435,LOC107595422,LOC107087943,LOC107666149,LOC108272058 coding downstream 191979 36885380 ~ 36900670 (-)
AMCG00007908 NA coding downstream 212969 36870131 ~ 36879680 (-)
AMCG00007920 NA coding upstream 44927 37138227 ~ 37141287 (-)
AMCG00007926 stk4,LOC103371188,LOC108435692 coding upstream 124470 37217770 ~ 37238928 (-)
AMCG00007928 LOC105008385,LOC108414618,LOC106566651,LOC107702880 coding upstream 155079 37248379 ~ 37259255 (-)
AMCG00007927 ywhaz,ywhaba,LOC105901861,LOC105906814,LOC100136192,LOC108412308 coding upstream 167266 37260566 ~ 37267059 (-)
AMCG00007932 NA coding upstream 258311 37351611 ~ 37353614 (-)
G27302 NA non-coding downstream 122893 36967127 ~ 36969756 (-)
G27254 NA non-coding downstream 324710 36767653 ~ 36767939 (-)
G27252 NA non-coding downstream 332060 36760345 ~ 36760589 (-)
G27243 NA non-coding downstream 346783 36744068 ~ 36745866 (-)
G27197 NA non-coding downstream 600803 36491196 ~ 36491846 (-)
G27435 NA non-coding upstream 473469 37566769 ~ 37566983 (-)
G27436 LOC107666014 non-coding upstream 473903 37567203 ~ 37567566 (-)
G27438 NA non-coding upstream 476959 37570259 ~ 37570881 (-)
G27463 NA non-coding upstream 683769 37777069 ~ 37777318 (-)
G27491 NA non-coding upstream 923930 38017230 ~ 38017469 (-)
AMCG00007907 NA other downstream 246066 36842475 ~ 36846583 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other downstream 1081654 36003193 ~ 36010995 (-)
G26961 LOC101154678 other downstream 2222842 34869435 ~ 34869807 (-)
AMCG00007835 LOC107594750 other downstream 5276498 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 5749857 31338716 ~ 31342792 (-)
AMCG00007929 NA other upstream 146784 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 401611 37494911 ~ 37499392 (-)
G27437 NA other upstream 474317 37567617 ~ 37569284 (-)
G27439 NA other upstream 477657 37570957 ~ 37571488 (-)
G27442 chd6 other upstream 479734 37573034 ~ 37588525 (-)

Expression


Co-expression Network