G27416 (blcap,bc10)


Basic Information

Item Value
gene id G27416
gene name blcap,bc10
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 37494911 ~ 37499392 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU34303
TGTAAACCCATTTATTTTATcagcttatttttaaaaacatttggtgGCGAGGAGTAGACTGTACCATGCAACAGGCTCGTACATCACAAAAGGTGCAAATGGGAAATGCAGACACGGACTCTCGGCggccacagacacagacaggacCACTGCCCGGCAGTGAGGAGGAAGCAAAACCAGACCCAGACagaatgaaaatacacacatcaGCATTGTAAACCCTAGCAGTTGTTTTCAttctatatatagagagaaagatatatatatatatccctctgtctttctccaGCCATTGAAAGATAATCCACACATAGTAAAACAAAGCAGTAGTTTTACCATCTTTCTGCTTAAAGTATCTAAAGCAGCAACAAAGTGAGGGGGGGGTGGAAGCAAATAAAGTTCAACATTGTCAAAACTGCTAAGCTGGCATTGTCTGATATGTGCCTAGTATTAAAACTGCAATAGTATTCTATAAAGTGACTATTAAATAGTTTAACTATAATGCTAACGCACATTGTCCCCTAAAGCAACACTGtacccaaccccccccaccctgtcaGGTGTACACGACCACAATGGAAGAGAGGAGCCACATTGTTGGGCGTCTCAGTCAAGTGAAACGCCACAGAATTCCCCAAAGTCTTACATCCAATGTGGATAATAAGTAGCAGAAATTATAGGCTCGTCTAGTgtatatcaacaacaacaaaaacaattatttacaaGTAACTAAAACCATTTAAACGTATTATGCATGACAGGAATTGTGCAAATcttgcagttttttgtttgtttttagatctGAAATTAAACAGATATGACAGATTTATTCACCCACTAAGCAACTACAAGTGAAAGACACCAGCAGGCTACTGCAACACTGCCCAACAGCCCAGCAGTACAGCTCCCAGCACTCCCACACAGCCAGGTCCAGCAGATGCCTGTAGCAGAGGTTGCTAATTTTACGGCTGCAAGAATTCCTTCCACGATCTAGCAGGAGCTCCAGTTACTCTTTAACACCTCCGACAGAGTGAAAATAGCAGGATCTAGGTCATACGATCTAGGGATGCAGCTTGCACTGAAGCAAACAGACAATTTCACCAGTTATTGATGGAGCACCATCCCGACCGCCTGTCATGAACCCACAATGCATCAGAGATGAGGAATGCAAGCCCTGAAGAACTGCAAATACCAAAGGGACTGGCAACAGCATACAAAAAGGCAATGatctaattttcttttctgaatGCCTAAAAATAGAAACCCAACCGAGCATTGAGTTAAACATAGCATGAGGTTTCACATTCATATTATACATAATGTGCACCtacttcactttattttttcaagccACTCGTCATCACTGCCTTGCGAATCACAGCAACGTGGGCCTTGTAAACAACCCAGCTGTACCACTCAGACTGACAAAAACTGCATTCTTTACAAATACTGCAAATGTTTGCAAAATCTACTGAATTTCTATACTGCAAGAAAGATTTACAGACCCAGTAAATGCTGTCACATGTGAATTAAAAtccaacaaaaccaaaacaaacaaacagaacaaggAAGTCAGACGACACAAGACAGAACtgtcaaatacaaaaacatgggTTTCCTAGAATATCACACCAAGACGAATACTTGTATGTTTTAATGGCAAACAGCTCTTCAGCTATTGcaacaatttaagaaaatacaaacacgCTTTGCatcagttattttgtttctttatccaccctaccctcccccccaaaaaactcaTCAAATTAAAAGTGACATTACTCTGCGGAGATGTCTGGATGCAGTGCAATCACAACTCAGTGGACAGTCTGTGACAAAAACAGGGACTTTTGTTCATCTATGATCTCCTTCCACATCTTTGCCGTCTGCTTTGGTGGCCTCACGCTGCACTTCTGAGAGAAGCCCAGTCTTATAAACCTGCTGTGTGAGCAACTTCGCCACCACGCCTCATGAGTCACTTTTGGAAAACTGGTGCGATCCATGCCAGAGGAATCCTTCCCCCTGGCGCAATACACTTAATTACATGTATAGTTTAGCCACCATATTCAtgacattaacaaaaaaagttaCTCTAATATACTTGAATGACAAAAGACTATAGGCATTTTAATACCATCCCCACAGTCTTAATCCCGGTCAGACAGCACAACGGCTCTCTTTTAAAGCACTCGTGCACTTCACCTCAATCATCACGGCCCAGACCTGCTCTTCTGCTTCTAGTTAATTCAAGTACAGCTGCAGTCACCCTTCACCGGCTCCTATCCCACCCGACCAGGTTAATAAATCCATCTGTCATTTACACGGCAGCTTGTGGCAATCAGGGAAAGGACAGAAACTAACTGCGCCCGCCATTTCAGGTTTTACTTGGAAGATAAttcctttcatttattattatttttttaaataaactttattaaatgtaaccacacacacaatgaatggGATTTACACTTTTCCATGATATACGAGATCACACCGACTCCACAGAGAATTATGCCGTCCCCCCAACCCCAAACTTTGCCAACTCATGATTGTAAGCAAGATCAACTTCTTGGTGATCAATATCCACAGAAGCCCACGCCGACACGTCCAGTCATGAGGGAAAACTCAAGCGTTTCTCTGCAGCACATTGTCCTCATTGCgctgatttttcttttgctttttaacagaaacacacaggctTTGCACTTTCCCCTCCTACAAATCTGGgaggacaaaacaaacaaaaccaaaaaaataaccGGTAATGATTTCTCTAatgtaaatcaaacaaaatgcataaacagCCACTGACGATGAAGAAATAGCTGGGCAAACAGTCCATGCAAAATGGAGAGACAGATCCTGGGAGaccaacaaagaaaataaaaaaacctggCACAAGGAAGAGAATGAGAGGAGAGTAAGACTAGACAAAACAAAGCCAGCCCAAGTGCCTTCCGCCCTGCAGGTGAGAATTAGTCCTCAACAAAGAGTTTACAGcaagaaaatcataaaataaaaaataaacagattctATATTCACAGCATGAGTGACAGATACAGATTGTCCAGTTTCCAAGGATTTAGAAATAACTTGGGTCCTCAGGGGTGGTGGCGGAGGCAGAGGatgggggggaagggggcacGTTGTCCACAGTCCACCGACCCATGCAGACCAGCCCGCCTAGGAGGCCACGATGCTGGGGTCATGGGCCGACTCGGGCAGGGGGGAGTCGCCGCAGTGGTACAAGAAGCAGTTGCCCCAGCAGCTGTAGCAGATGAGAAACAGCGCTGCCAGGAAGACCAAGGCACAGATGGTACAGGGCTTCCTTTCCAGAAGAAAGCTGAGCAGGTAGAAGCCCATGAACATGGAGTGGTTGAACCACAGGGCCGGGTTCAGGGGCTTGGGGATGAGGAGCACTGGCAGCAGCCACTGTAGGCAGTACATCGTGGCGGATGTTTGCAAGTCTGTccgtctcacacacacacccagaagGGAGATCCGCGCAGCCGCCGCGGCGCCGGACTGGGATGGCAGTGCTTTGGCTTCGCTCGCATCAAGTcagtcctATTCTTCCGCTTTCCGGGAGAACCGAGAGGTGGCTCGGGGGTCAATGTGCGGCGCTACAGCCCCTTGAGAGCGGAGGCCAGGCGGTACAGCTGCGGTCTAGCTGTGGTTCACCAGCCGGGCCGCACTGCGTGTCGGCGGCCATCAGAGCAGACCTACCGGCCCTGGATCACTCCTCTCCGCGCAGCGCGTCCGCCTCCATCGCCGCCACTCTCCTGCGTAGCTGCTTCTCTCGCAGGACCCCGGCAgataggggtgggggggaggagggagcTGTCTATCTCACGTCCTGTTTCTTCACCTGCTGTGGTCTGGGCATGGTAGGACCCACATGAATGACTCAGTTTCCTCTgatatgcattttttgtatggaaatatatgaatacagaCACATATAGCATTGAAATGCGTCACTAAGAATAAAAAGCCCTATACTGTCCGTTTGTTTCTTCAGGCATTGCTTGGGCAGCAACGTATTGTAAGCCCCCTAATATG

Function

symbol description
blcap Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in myotome. Orthologous to human BLCAP (BLCAP apoptosis inducing factor).
bc10 Orthologous to human BLCAP (BLCAP apoptosis inducing factor).

NR:

description
bladder cancer-associated protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34303 True 4069 TUCP 0.45 2 37494911 37499392

Neighbor

gene id symbol gene type direction distance location
AMCG00007941 tmem74b,LOC102310340,LOC102787133 coding downstream 4078 37487728 ~ 37490833 (-)
AMCG00007935 NA coding downstream 56402 37423717 ~ 37438509 (-)
AMCG00007936 NA coding downstream 90048 37404441 ~ 37404863 (-)
AMCG00007933 NA coding downstream 111316 37369911 ~ 37383595 (-)
AMCG00007932 NA coding downstream 141297 37351611 ~ 37353614 (-)
AMCG00007939 NA coding upstream 1392 37500784 ~ 37519123 (-)
AMCG00007943 LOC108442925 coding upstream 292049 37791441 ~ 37827192 (-)
AMCG00007945 ptprt coding upstream 367058 37866450 ~ 37876752 (-)
AMCG00007946 LOC106565046 coding upstream 413186 37912578 ~ 37916476 (-)
AMCG00007944 LOC106582631 coding upstream 425879 37925271 ~ 37936478 (-)
G27335 NA non-coding downstream 401611 37092649 ~ 37093300 (-)
G27302 NA non-coding downstream 525155 36967127 ~ 36969756 (-)
G27254 NA non-coding downstream 726972 36767653 ~ 36767939 (-)
G27252 NA non-coding downstream 734322 36760345 ~ 36760589 (-)
G27243 NA non-coding downstream 749045 36744068 ~ 36745866 (-)
G27435 NA non-coding upstream 67377 37566769 ~ 37566983 (-)
G27436 LOC107666014 non-coding upstream 67811 37567203 ~ 37567566 (-)
G27438 NA non-coding upstream 70867 37570259 ~ 37570881 (-)
G27463 NA non-coding upstream 277677 37777069 ~ 37777318 (-)
G27491 NA non-coding upstream 517838 38017230 ~ 38017469 (-)
AMCG00007929 NA other downstream 251928 37240084 ~ 37242983 (-)
AMCG00007907 NA other downstream 648328 36842475 ~ 36846583 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other downstream 1483916 36003193 ~ 36010995 (-)
G26961 LOC101154678 other downstream 2625104 34869435 ~ 34869807 (-)
AMCG00007835 LOC107594750 other downstream 5678760 31804899 ~ 31816151 (-)
G27437 NA other upstream 68225 37567617 ~ 37569284 (-)
G27439 NA other upstream 71565 37570957 ~ 37571488 (-)
G27442 chd6 other upstream 73642 37573034 ~ 37588525 (-)
G27502 NA other upstream 586537 38085929 ~ 38091878 (-)
G27522 NA other upstream 661894 38161286 ~ 38164542 (-)

Expression


Co-expression Network