Gene
RNA
| Item | Value |
|---|---|
| gene id | G27436 |
| gene name | LOC107666014 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 37567203 ~ 37567566 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU34323 | True | 364 | lncRNA | 0.58 | 1 | 37567203 | 37567566 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00007939 | NA | coding | downstream | 48080 | 37500784 ~ 37519123 (-) |
| AMCG00007941 | tmem74b,LOC102310340,LOC102787133 | coding | downstream | 76370 | 37487728 ~ 37490833 (-) |
| AMCG00007935 | NA | coding | downstream | 128694 | 37423717 ~ 37438509 (-) |
| AMCG00007936 | NA | coding | downstream | 162340 | 37404441 ~ 37404863 (-) |
| AMCG00007933 | NA | coding | downstream | 183608 | 37369911 ~ 37383595 (-) |
| AMCG00007943 | LOC108442925 | coding | upstream | 223875 | 37791441 ~ 37827192 (-) |
| AMCG00007945 | ptprt | coding | upstream | 298884 | 37866450 ~ 37876752 (-) |
| AMCG00007946 | LOC106565046 | coding | upstream | 345012 | 37912578 ~ 37916476 (-) |
| AMCG00007944 | LOC106582631 | coding | upstream | 357705 | 37925271 ~ 37936478 (-) |
| AMCG00007953 | NA | coding | upstream | 578953 | 38146519 ~ 38148924 (-) |
| G27435 | NA | non-coding | downstream | 220 | 37566769 ~ 37566983 (-) |
| G27335 | NA | non-coding | downstream | 473903 | 37092649 ~ 37093300 (-) |
| G27302 | NA | non-coding | downstream | 597447 | 36967127 ~ 36969756 (-) |
| G27254 | NA | non-coding | downstream | 799264 | 36767653 ~ 36767939 (-) |
| G27252 | NA | non-coding | downstream | 806614 | 36760345 ~ 36760589 (-) |
| G27438 | NA | non-coding | upstream | 2693 | 37570259 ~ 37570881 (-) |
| G27463 | NA | non-coding | upstream | 209503 | 37777069 ~ 37777318 (-) |
| G27491 | NA | non-coding | upstream | 449664 | 38017230 ~ 38017469 (-) |
| G27557 | NA | non-coding | upstream | 872037 | 38439603 ~ 38439862 (-) |
| G27626 | NA | non-coding | upstream | 1143286 | 38710852 ~ 38712337 (-) |
| G27416 | blcap,bc10 | other | downstream | 67811 | 37494911 ~ 37499392 (-) |
| AMCG00007929 | NA | other | downstream | 324220 | 37240084 ~ 37242983 (-) |
| AMCG00007907 | NA | other | downstream | 720620 | 36842475 ~ 36846583 (-) |
| AMCG00007883 | chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 | other | downstream | 1556208 | 36003193 ~ 36010995 (-) |
| G26961 | LOC101154678 | other | downstream | 2697396 | 34869435 ~ 34869807 (-) |
| G27437 | NA | other | upstream | 51 | 37567617 ~ 37569284 (-) |
| G27439 | NA | other | upstream | 3391 | 37570957 ~ 37571488 (-) |
| G27442 | chd6 | other | upstream | 5468 | 37573034 ~ 37588525 (-) |
| G27502 | NA | other | upstream | 518363 | 38085929 ~ 38091878 (-) |
| G27522 | NA | other | upstream | 593720 | 38161286 ~ 38164542 (-) |
