G27518


Basic Information

Item Value
gene id G27518
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 38144984 ~ 38146850 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU34416
GCAACGATGGTTTCCTTGCCCCATTCTTTATTAGAAATTACTAAAACAAAGTGCTTATAATAAAGAACAGAacgtgtatttaaaaaaaactaactagTAGACTGTACAATAATTTAATCGAACAATAAatcagtcattaaaaaaaaaaaaaaaaaaagtactgatttaataggaaaataaaatatttaatatttttaaaaacaaaggcggtgaaaaaacagcaatttcCACATACAGGATGCTTTCCAGGTTGAGGTAGACAAAACGTGTGTGAACAGACTCTTACACCTGCACCCAGGAGCAGAGTCCACAGGACCCCCGGCACAAACAAAACTCAACTCTTCACCTCGAACAGTTCAAAAGGTGATTTTCATCAGTTTACGTTCATTTCAAAGGTATTTGCattgtttggaaaaaaataaataaaaaacccCATaatactacattattattaataataataacaacaacaacaacgaggTGCCTAGCTGGAGGAAGAGGGCAAGAGCAAATTCCTACCAGATAAGACAGCAGCAGAACCAATTGAttacaactaaaaaaaaaaaaaactgcctaCTCTCTCCAACCACTTCTAAGGCACCCAGAGAGAAAGCTCAACCTGTAAGTGATGAGGAAAATACCAGAGGAAAACCACCCAACCGTGGCTTTGAGGATTAATGGCGTCATAATGACATCAACCACAAGGAACATGTGACTGCATGTgaaggaaagaagaagaaagtaaAGGAAAGTGCAATGATTGGCAGATATTAATTTCCAAAGCCCTAATTAGAATATAAACTTGGGATCCAGCCCAAAACTAGCAGGAGAAAAACTTTATATTTAGACatgctggagaaaaaaaaaaaaaaaaaaaaaaaaactaccaaaCAGCACACAAGCAGCTAGATCAGgagattacaaaaataataaggtaagaaatgtgaaaaagagGGAGGATTCTGTGGAAATTCTAATCTTTCAAAACCCACTAATTACAAAACAATCTTCGGCTCTTTAACCTGCATTcttaatacagaaaaaaaaaaaagtttgtacaCAAAAGGGCCTCAGCTGAGAGATCCGCGACATTATGGCTATTGTCTGacaacaataatgaaaacaaacaacacaaaaaaggcCAACTTTGGCAAAAGGCTGACAACAGAAGCTCTAACATTGACATTCTGCTGCACTGGCCGCCAGTTTACGGTCTTAACTAAACTTTGGCAATGAACAGAGACAGGTCCAAGTCCGCACCCTGCAGTCCAACAGCAAACTACAGCAGGGAGCTCCTGGCTGGAATGGGACATCACAGATTGTCCACATGTCCTGCAGTTCCTGGCTGTGTCCACCCCAGTCCCAAATGagtgggaggaagaggaggaaggaggagaaagTCTTCAAGAATAAGAATTCCATTGTCTGGCAGGAGGTCTATGCATTACAGGGCAATGGCCAAGTCTTCCCCTGCTTGCTTTCctttcttccctccctccctccctccctctcccgtCTGTCCACTAGGCCCGTCCTCAGTGGGCCGCCTTCACCCTGCTGAGCTGCTCCAGTCTGTGTTTCAGCTGGTCTTGCCTGTGCCGCAGCGCCTCGCTCTTGGATCCCAGCTTCCTGCCCTCGCCCTCCAGCCCGCGGATGCACTCCCTGGCCTTCTTCAGGATCACCACCTTGGAGGCCTTGTCGTTGTTGGACAGCTCGGGCACGTGGTCGCGCAGGCGCAGGAAGCAGTTCTTCAGCTCGTTGCGCCGCTGCCTCTCCATCACGTTGTGCGTCCGCCgccgctcctcctcctccatgtcGGCCGAGAGACGGGCCGCGCTGCCGCCGGACCCGCGGCCCCGACCGGCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34416 True 1867 TUCP 0.45 1 38144984 38146850

Neighbor

gene id symbol gene type direction distance location
AMCG00007948 NA coding upstream 58233 38080756 ~ 38086751 (+)
AMCG00007951 LOC107385061,LOC106582629 coding upstream 74141 38067388 ~ 38070843 (+)
AMCG00007947 NA coding upstream 118134 38018892 ~ 38026850 (+)
AMCG00007950 NA coding upstream 130190 38011176 ~ 38014794 (+)
AMCG00007949 pigu coding upstream 134189 38002950 ~ 38010795 (+)
AMCG00007956 NA coding downstream 326866 38473716 ~ 38476488 (+)
AMCG00007959 pmepa1,LOC106582623 coding downstream 417625 38564475 ~ 38570223 (+)
AMCG00007965 NA coding downstream 429272 38576122 ~ 38605013 (+)
AMCG00007963 NA coding downstream 474272 38621122 ~ 38627736 (+)
AMCG00007964 NA coding downstream 489632 38636482 ~ 38661331 (+)
G27497 NA non-coding upstream 117061 38027380 ~ 38027923 (+)
G27489 NA non-coding upstream 127840 38016868 ~ 38017144 (+)
G27462 NA non-coding upstream 367522 37777065 ~ 37777462 (+)
G27400 blcap,bc10 non-coding upstream 645599 37495159 ~ 37499385 (+)
G27334 NA non-coding upstream 1051654 37092649 ~ 37093330 (+)
G27552 NA non-coding downstream 292724 38439574 ~ 38439892 (+)
G27553 NA non-coding downstream 294686 38441536 ~ 38442071 (+)
G27561 NA non-coding downstream 334447 38481297 ~ 38482391 (+)
G27581 NA non-coding downstream 525021 38671871 ~ 38729032 (+)
G27648 NA non-coding downstream 645599 38792449 ~ 38834594 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other upstream 928426 37203870 ~ 37216558 (+)
AMCG00007889 NA other upstream 1842143 36296218 ~ 36302841 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other upstream 2524183 35610982 ~ 35620801 (+)
AMCG00007854 NA other upstream 4350043 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 6704606 31414154 ~ 31440378 (+)
AMCG00007952 romo1,LOC102788570 other downstream 21720 38168570 ~ 38170146 (+)
AMCG00007957 raly other downstream 209079 38355929 ~ 38423155 (+)
G27551 NA other downstream 285195 38432045 ~ 38436595 (+)
AMCG00007970 rab22a,LOC107596793 other downstream 545889 38692739 ~ 38708915 (+)
G27847 LOC108410937,LOC797048,LOC107560508,LOC107740256,LOC106583675 other downstream 1356229 39503079 ~ 39504377 (+)

Expression


Co-expression Network