G27522


Basic Information

Item Value
gene id G27522
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 38161286 ~ 38164542 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU34421
GCCGTCTGGATCGAGTTTAGGGTTTCCGTAAGAGCGGGGTCGTGCCACACAGCGAGACAGCTGGGGTTTCACTCCCGCAGCACGGCAGCGAGAACAGCGATCGAAGCAGTGTGTGGATGAGCCCTTCCTGCTGCAGAGCGCTCGGGAATGCTGCTGTGGACAGTGTGGCGACCGGCCCCTCGCGCTGCGTCTGCATCAGCTGTGCTCTGTCCTGCCAGAAACCTCCCCTACATGGCTACGTTAATGCCCGGACCTGGGAGACGTCACAGCACTCCCCACAAGAGGACTCCTGtttgctctgtctctctctcttcccccccccctctttctaGAAAGGAGAGGGGTGCCAGACACACCCTGGAGGGAGCGCattggggtgggggaggggccCACATGGAGAGCACTGTATTATCCCCCCCATCCCAAAGAGGTCTGGGGACTTACAGCGGAGGGTTTTGAACAGCAGCATTACCGTTAATCACGTCACCATCAACTCTGTCATTAATCCCGACACTTGAGACAGGGGTCCTTTCTGCGGTGGCAGGGAAACTGTGTCCCAGGCCTTCAAGACTCTCAACCCCTTTCCACACAGCTGAGCTTTTTATCCCAAAGACTGTCTCTGCCTTTCAGTGAAGTGGTGAAGACAGGAGGCGTTTTATTCTTGGGCAAAATAATCAGTCCTAGAGAGCAGGAAGAGGAGAGTGGTTGGGAATGAAATTATACATCTCAGTATTTTTAATAGGCTGCTGGTTACTCGGATAAAACTAGAACACTGTTTTTATTAGATAAGGAACAGGCTGGAAATGTTTGAAGCGTTGTGTGGAGACAAGGCTCTGTGTGAATGAATGGAGGGAAATGAGctcatacattttttgttttttgttttaaaggtttaaatcTGTGATT

Function

GO: NA

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU34421 True 906 TUCP 0.52 2 38161286 38164542

Neighbor

gene id symbol gene type direction distance location
AMCG00007953 NA coding downstream 12362 38146519 ~ 38148924 (-)
AMCG00007944 LOC106582631 coding downstream 224808 37925271 ~ 37936478 (-)
AMCG00007946 LOC106565046 coding downstream 244810 37912578 ~ 37916476 (-)
AMCG00007945 ptprt coding downstream 284534 37866450 ~ 37876752 (-)
AMCG00007943 LOC108442925 coding downstream 334094 37791441 ~ 37827192 (-)
AMCG00007954 ergic3,ergi3,LOC107685813,LOC106565050 coding upstream 669 38165211 ~ 38176299 (-)
AMCG00007955 LOC101480083,LOC100694607,LOC102788290 coding upstream 11979 38176521 ~ 38181573 (-)
AMCG00007958 eif2s2,if2b,LOC105906812 coding upstream 262806 38427348 ~ 38434063 (-)
AMCG00007961 ahcy,sahhb,LOC107596784,LOC107729767 coding upstream 319269 38483811 ~ 38492269 (-)
AMCG00007962 chmp4b,LOC106565064,LOC108243665 coding upstream 331950 38496492 ~ 38501834 (-)
G27491 NA non-coding downstream 143817 38017230 ~ 38017469 (-)
G27463 NA non-coding downstream 383968 37777069 ~ 37777318 (-)
G27438 NA non-coding downstream 590405 37570259 ~ 37570881 (-)
G27436 LOC107666014 non-coding downstream 593720 37567203 ~ 37567566 (-)
G27435 NA non-coding downstream 594303 37566769 ~ 37566983 (-)
G27557 NA non-coding upstream 275061 38439603 ~ 38439862 (-)
G27626 NA non-coding upstream 546310 38710852 ~ 38712337 (-)
G27639 NA non-coding upstream 584585 38749127 ~ 38767568 (-)
G27661 NA non-coding upstream 611619 38776161 ~ 38779752 (-)
G27668 NA non-coding upstream 691006 38855548 ~ 38855777 (-)
G27502 NA other downstream 69408 38085929 ~ 38091878 (-)
G27442 chd6 other downstream 572761 37573034 ~ 37588525 (-)
G27439 NA other downstream 589798 37570957 ~ 37571488 (-)
G27437 NA other downstream 592002 37567617 ~ 37569284 (-)
G27416 blcap,bc10 other downstream 661894 37494911 ~ 37499392 (-)
AMCG00007984 NA other upstream 740216 38904758 ~ 38907811 (-)
AMCG00007983 NA other upstream 760039 38924581 ~ 38937663 (-)
AMCG00007990 ppp1r16b,LOC106566117,LOC107558141 other upstream 868245 39032787 ~ 39049597 (-)
G27720 NA other upstream 889611 39054153 ~ 39055679 (-)
AMCG00007993 dynlrb1,LOC106565026 other upstream 924015 39088557 ~ 39091895 (-)

Expression


Co-expression Network