G27551


Basic Information

Item Value
gene id G27551
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 38432045 ~ 38436595 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU34460
CCTTGATGCCTTCCTCCACTTCACTTTCAAATATCTTcttgggtttctttttcttcttcttctggttGAAAAAGTTCAAGTCGTCCAGATCATCTGATGCTTCTTTTCTCCTGCCCTCGTCCTCGTCCAGGTCCAGCTCGCGGTCCTCCCCCACCTCGGGCTCGGCCTCCCTGGTCTCGGGGGGCTGGGTGTCCTCACTGGGCGCTTcacctccctcctcctccaacATGAAgggcttcttcttcttcttcttcttctttgtcatGTTGGGGTCGAAgatcatctgcagagagagcGACAATTACAACCGTggacccccgcccccccaatctgtttgtttaaagcagttttgttcccagccctggtcctagacgaccccctaccctgctggttttcgttccaaccaagttctcaattacttaattgaacccttactGAACTCTTCATTTCCTAAATcaatcttaattattttaaacagtaggagTTTTAAGTTACGTACAGCATTGTATGAAGACCTTATTAATGAACCAGCTCATATTACACCATATAAAGTCAactctaagcagattgttacttcaattaaggttcaattaagtaattaagagttcAGATGGAAGAacaaacagcagggtagggggcctccagggccaggattgggaacccctagtttaaataataatactgcatcATTCCCCATTACCTTTCTACGCAAACATAAACAGGGACCACAATCTAAACCTTATACTGCGTTTTGTCCCACTGCACATCTCATTAGACATAAAGACAGTATGTTGTCCTCTACTATACCTGCTGGTCGCTGTTGGAGGGTGGTTTGGAGCCCTGCtggagggggggggttaaaCTAAATtccttgttaaaaaaagaaaagaagcaatACAAGGATCAAAGATCAGGCGTTGTGTGGGGCGGATTTCCTACACTGGGGTGGTCAGGGACAGGGATGACGGGCCAATGGAGAGCATGGGGACGTCTTTGTCACAGTCAGAGACAGGACGGGACACCGCATGAGACGGATCCGGTTCTGCCTCAGGCCCAGTGGACTGGACCGCTCGTCAGGGTGTCAGAAACTCGTCCTGAAGGCAAGGCCTGTTACAAACTATCTCCCCTCGGAGCACACGGTTAGAAAGGCCTTCAGCCCAGCCGCGGCCGCCATGCAGTCATTCATTCCGTCTCGCACTCTGCGCCCCGCGGGTGTCCAAGCACGCCGCTCTGCCGGGGCTGCCCGTTGCACCGGGGGCTGCAGCCCGTGTGCGGCAGCATGGACGGCGCTCACATGGGGACCCGGGAGAGAGCGCCGCCAGCCCGAGTAGGCCCGACCCGCGCCGCCTGCACACTGGCCTTCTTCACAGGCCGACATGCACGGCAGGGCAACCGGCATGATGTACCGAAACAGCGGCCGACTCACCTCGTCTCCCGACATGTCTGGTTTCCGTGTCTCGCtgtttttgctttgctgttATTTGTGAAATTCAATCGCTCAGCGCCTCTCCTCACTGCTCCCCCTTCACTGCGACTAGTTTCTTGCATCAGCTTTCGCCCACTGCGCAGGTGCGGGCTTCCCGTTTCCCAACGCGCGTACGTCACAGCCTGACCAAAGCCTGCCGGGATCTGTAGTTTTcgaaacaaaaaagtttccagaTGTTTTCAATTTCAACTTCCTATGGGGTTTTGCCTTTCACAGTGCAGTCTGTGGACCAAGGAGTGCTGTGCTCAAAACCACTGACATATGAAGAGTGAGATGATATTGTGCAGAAGACTGTGTGCGTCAGAAAGCATCTGTATTCTGCCAGCGGAATGTACTGTGCACTTCTGGGATCGGAGCCTCACAAAAATGTAGCAAGAAGTTGATTAAGGAAGAAACTGTAGATGTACACTCAgcatttttcaatacaa

Function

NR:

description
PREDICTED: RNA-binding protein with multiple splicing 2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34460 True 1914 TUCP 0.51 3 38432045 38436595

Neighbor

gene id symbol gene type direction distance location
AMCG00007948 NA coding upstream 345294 38080756 ~ 38086751 (+)
AMCG00007951 LOC107385061,LOC106582629 coding upstream 361202 38067388 ~ 38070843 (+)
AMCG00007947 NA coding upstream 405195 38018892 ~ 38026850 (+)
AMCG00007950 NA coding upstream 417251 38011176 ~ 38014794 (+)
AMCG00007949 pigu coding upstream 421250 38002950 ~ 38010795 (+)
AMCG00007956 NA coding downstream 37121 38473716 ~ 38476488 (+)
AMCG00007959 pmepa1,LOC106582623 coding downstream 127880 38564475 ~ 38570223 (+)
AMCG00007965 NA coding downstream 139527 38576122 ~ 38605013 (+)
AMCG00007963 NA coding downstream 184527 38621122 ~ 38627736 (+)
AMCG00007964 NA coding downstream 199887 38636482 ~ 38661331 (+)
G27497 NA non-coding upstream 404122 38027380 ~ 38027923 (+)
G27489 NA non-coding upstream 414901 38016868 ~ 38017144 (+)
G27462 NA non-coding upstream 654583 37777065 ~ 37777462 (+)
G27400 blcap,bc10 non-coding upstream 932660 37495159 ~ 37499385 (+)
G27334 NA non-coding upstream 1338715 37092649 ~ 37093330 (+)
G27552 NA non-coding downstream 2979 38439574 ~ 38439892 (+)
G27553 NA non-coding downstream 4941 38441536 ~ 38442071 (+)
G27561 NA non-coding downstream 44702 38481297 ~ 38482391 (+)
G27581 NA non-coding downstream 235276 38671871 ~ 38729032 (+)
G27648 NA non-coding downstream 355854 38792449 ~ 38834594 (+)
AMCG00007957 raly other upstream 8890 38355929 ~ 38423155 (+)
AMCG00007952 romo1,LOC102788570 other upstream 261899 38168570 ~ 38170146 (+)
G27518 NA other upstream 285195 38144984 ~ 38146850 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other upstream 1215487 37203870 ~ 37216558 (+)
AMCG00007889 NA other upstream 2129204 36296218 ~ 36302841 (+)
AMCG00007970 rab22a,LOC107596793 other downstream 256144 38692739 ~ 38708915 (+)
G27847 LOC108410937,LOC797048,LOC107560508,LOC107740256,LOC106583675 other downstream 1066484 39503079 ~ 39504377 (+)
AMCG00008007 ncoa5,LOC107666089,LOC107740257 other downstream 1073816 39510411 ~ 39592411 (+)
AMCG00008010 NA other downstream 1103625 39540220 ~ 39545607 (+)
AMCG00008020 NA other downstream 1380432 39817027 ~ 39834952 (+)

Expression


Co-expression Network